Skip Header

 
Contribute Send feedback

Unreviewed, UniProtKB/TrEMBL Q1IJ96 (Q1IJ96_ACIBL)

Last modified July 22, 2008. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information

Hide | Top

Names and origin

Protein namesSubmitted name:
    Two component transcriptional regulator, winged helix family EMBL ABF43054.1
Gene names
Ordered Locus Names: Acid345_4054
OrganismAcidobacteria bacterium (strain Ellin345) [Complete proteome] [HAMAP]
Taxonomic identifier204669 [NCBI]
Taxonomic lineageBacteria › Acidobacteria › Acidobacteriales › Acidobacteriaceae

Hide | Top

Protein attributes

Sequence length226 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existencePredicted.

Hide | Top

General annotation (Comments)

Sequence similarities

Contains 1 response regulatory domain. Spearmint SPM001867 RuleBase RU000713V1

Hide | Top

Sequences

Sequence LengthMass (Da)Tools
Q1IJ96-1 [UniParc].

Last modified June 13, 2006. Version 1.
Checksum: 8C4EFBDFC78368AD

FASTA22625,678
        10         20         30         40         50         60 
MDRILVIEDD ATVQKALRRT FESAGFEVVV APDGATAVQT FQATSPRAVL LDLRLPGKSG 

        70         80         90        100        110        120 
QDICREIRGF SPNVPILVLS AASDVVDKVL LLELGADDYV TKPFSPRELL ARVRTALRRL 

       130        140        150        160        170        180 
IPSIDKQEVY NFDEIQVDFG KMELLRSGQP VALTPQEFKM LRFFLNNKDR VVSRNELLNE 

       190        200        210        220 
VWGYHSYPTT RTVDTHILRL RQKLERDPAD PIHFRTVHGT GYKFVE

« Hide

Hide | Top

References

[1]"Complete sequence of Acidobacteria bacterium Ellin345."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Kiss H., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A., Kuske C., Janssen P.H., Richardson P.
Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Hide | Top

Cross-references

Sequence databases

CP000360 Genomic DNA. Translation: ABF43054.1.
RefSeqYP_593128.1.

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID4072476.
GenomeReviewsGene locus Acid345_4054 in contig CP000360_GR.
KEGGaba:Acid345_4054.
NMPDRfig|204669.6.peg.4038.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMQ1IJ96.

Family and domain databases

InterProIPR001867. Sig_transdc_resp-reg_C.
IPR001789. Sig_transdc_resp-reg_receiver.
[Graphical view]
PfamPF00072. Response_reg. 1 hit.
PF00486. Trans_reg_C. 1 hit.
[Graphical view]
ProDomPD000039. Response_reg. 1 hit.
PD000329. Trans_reg_C. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SMARTSM00448. REC. 1 hit.
[Graphical view]
PROSITEPS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]

Hide | Top

Entry information

Entry nameQ1IJ96_ACIBL
AccessionPrimary (citable) accession number: Q1IJ96
Entry history
Integrated into UniProtKB/TrEMBL: June 13, 2006
Last sequence update: June 13, 2006
Last modified: July 22, 2008
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information