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Unreviewed, UniProtKB/TrEMBL Q1IIY2 (Q1IIY2_ACIBL)

Last modified July 22, 2008. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information

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Names and origin

Protein namesSubmitted name:
    Two component transcriptional regulator, winged helix family EMBL ABF43168.1
Gene names
Ordered Locus Names: Acid345_4168
OrganismAcidobacteria bacterium (strain Ellin345) [Complete proteome] [HAMAP]
Taxonomic identifier204669 [NCBI]
Taxonomic lineageBacteria › Acidobacteria › Acidobacteriales › Acidobacteriaceae

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Protein attributes

Sequence length237 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existencePredicted.

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General annotation (Comments)

Sequence similarities

Contains 1 response regulatory domain. Spearmint SPM001867 RuleBase RU000713V1

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Sequences

Sequence LengthMass (Da)Tools
Q1IIY2-1 [UniParc].

Last modified June 13, 2006. Version 1.
Checksum: E7905A46A0037D8E

FASTA23727,256
        10         20         30         40         50         60 
MSRILIVEDE EHLARGLQFN LQAEDHEVEV AGTGELALDL LLNEKQHFDV MVLDIMLPGK 

        70         80         90        100        110        120 
DGFTVARELR DAQNFIPILM LTARGRSEDI LQGFEAGTDD YLPKPFELAI LTARLDSLLR 

       130        140        150        160        170        180 
RRRWSQKVEA PVEPEVLRFN GKFLDFDALE LHVGDQVHNL TLMEAQLLQY LIRSAGRPVS 

       190        200        210        220        230 
RKSILEEVWG LHEDTDTRAI DNFIVRLRRY IEADPSHPKH LQTVRGIGYR FNTHPEN

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References

[1]"Complete sequence of Acidobacteria bacterium Ellin345."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Kiss H., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A., Kuske C., Janssen P.H., Richardson P.
Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

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Cross-references

Sequence databases

CP000360 Genomic DNA. Translation: ABF43168.1.
RefSeqYP_593242.1.

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID4072127.
GenomeReviewsGene locus Acid345_4168 in contig CP000360_GR.
KEGGaba:Acid345_4168.
NMPDRfig|204669.6.peg.4149.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMQ1IIY2.

Family and domain databases

InterProIPR001867. Sig_transdc_resp-reg_C.
IPR001789. Sig_transdc_resp-reg_receiver.
[Graphical view]
PfamPF00072. Response_reg. 1 hit.
PF00486. Trans_reg_C. 1 hit.
[Graphical view]
ProDomPD000039. Response_reg. 1 hit.
PD000329. Trans_reg_C. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SMARTSM00448. REC. 1 hit.
[Graphical view]
PROSITEPS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]

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Entry information

Entry nameQ1IIY2_ACIBL
AccessionPrimary (citable) accession number: Q1IIY2
Entry history
Integrated into UniProtKB/TrEMBL: June 13, 2006
Last sequence update: June 13, 2006
Last modified: July 22, 2008
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information