Skip Header

 
Contribute Send feedback

Unreviewed, UniProtKB/TrEMBL Q1IHT8 (Q1IHT8_ACIBL)

Last modified July 22, 2008. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information

Hide | Top

Names and origin

Protein namesSubmitted name:
    Two component transcriptional regulator, winged helix family EMBL ABF43562.1
Gene names
Ordered Locus Names: Acid345_4562
OrganismAcidobacteria bacterium (strain Ellin345) [Complete proteome] [HAMAP]
Taxonomic identifier204669 [NCBI]
Taxonomic lineageBacteria › Acidobacteria › Acidobacteriales › Acidobacteriaceae

Hide | Top

Protein attributes

Sequence length247 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted.

Hide | Top

General annotation (Comments)

Sequence similarities

Contains 1 response regulatory domain. RuleBase RU000713V1

Hide | Top

Sequences

Sequence LengthMass (Da)Tools
Q1IHT8-1 [UniParc].

Last modified June 13, 2006. Version 1.
Checksum: 0A842666A69F5D6A

FASTA24727,616
        10         20         30         40         50         60 
MMHNFPVTSP MGSSDESAGL SLLLIDDDAE LCEMMSEFLV QHGHSVDCIR NGPDGLKSAA 

        70         80         90        100        110        120 
ETKYDLVILD VMLPGMNGFT LLSQLRRRTP VPVIMLTART APHDRIQGLE AGADDYLPKP 

       130        140        150        160        170        180 
FDPDELLARV RAVLRRASQA PADALFDFTF DDVRINARTR QVWLKADLID LTAVEFDILY 

       190        200        210        220        230        240 
LLVCSAGRVL TREEISLAIL ERRLMSHDRS LDVHISHIRS KLETLAPFIQ TVRGVGYVFT 


GSRRQVL

« Hide

Hide | Top

References

[1]"Complete sequence of Acidobacteria bacterium Ellin345."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Kiss H., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A., Kuske C., Janssen P.H., Richardson P.
Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Hide | Top

Cross-references

Sequence databases

CP000360 Genomic DNA. Translation: ABF43562.1.
RefSeqYP_593636.1.

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID4071507.
GenomeReviewsGene locus Acid345_4562 in contig CP000360_GR.
KEGGaba:Acid345_4562.
NMPDRfig|204669.6.peg.4539.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMQ1IHT8.

Family and domain databases

InterProIPR001867. Sig_transdc_resp-reg_C.
IPR001789. Sig_transdc_resp-reg_receiver.
IPR011991. Wing_hlx_DNA_bd.
[Graphical view]
Gene3DG3DSA:1.10.10.10. Wing_hlx_DNA_bd. 1 hit.
PfamPF00072. Response_reg. 1 hit.
PF00486. Trans_reg_C. 1 hit.
[Graphical view]
ProDomPD000039. Response_reg. 1 hit.
PD000329. Trans_reg_C. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SMARTSM00448. REC. 1 hit.
[Graphical view]
PROSITEPS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]

Hide | Top

Entry information

Entry nameQ1IHT8_ACIBL
AccessionPrimary (citable) accession number: Q1IHT8
Entry history
Integrated into UniProtKB/TrEMBL: June 13, 2006
Last sequence update: June 13, 2006
Last modified: July 22, 2008
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information