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Unreviewed, UniProtKB/TrEMBL Q1BDL0 (Q1BDL0_MYCSS)

Last modified October 14, 2008. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information

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Names and origin

Protein namesSubmitted name:
    Transcriptional regulator, LuxR family EMBL ABG07024.1
Gene names
Ordered Locus Names: Mmcs_0908
OrganismMycobacterium sp. (strain MCS) [Complete proteome] [HAMAP]
Taxonomic identifier164756 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Mycobacteriaceae › Mycobacterium

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Protein attributes

Sequence length526 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existencePredicted.

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General annotation (Comments)

Sequence similarities

Contains 1 HTH luxR-type DNA-binding domain. RuleBase RU000707V5 Spearmint SPM000792

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Sequences

Sequence LengthMass (Da)Tools
Q1BDL0-1 [UniParc].

Last modified July 11, 2006. Version 1.
Checksum: 7DC5CC5673359867

FASTA52656,313
        10         20         30         40         50         60 
MTTAHNQVVT SRPQAAGLPT RAEVLAALSV AIDLGLGQPA EHMLRSALIA TRLADRLGLT 

        70         80         90        100        110        120 
RAQRDCVYYA TLIMWIGCHA DSHEYARWFG DDIAVRRASY LVDWSGLPYQ RFLLANIAHG 

       130        140        150        160        170        180 
EPLLQRLRTA TALYADARGN ISRLIHSHCA SAAMLAERIG LDDDVRRALG FTFERFDGGG 

       190        200        210        220        230        240 
LPEGASGDAI PIEMRVAQFA DLLEVHHRGY GVEGAVAMAR NRRGGQFDPA VVDAFVTDPD 

       250        260        270        280        290        300 
ALLSTPTAVW TTALQQAPDR HTRLDASGLD ALLIALGDFV DLKCPFTAGH SRAVAALAAD 

       310        320        330        340        350        360 
AATALGLDGE AVALTRRAGH VHDIGRIGVS NQVWSKGSAL STAEFERVRL HPYLTERILR 

       370        380        390        400        410        420 
QVPGLAQVAA VASNHHERLD GTGYPRGLSA RELTMPDRVL AAAVAFQAAC EPRPYRAQMT 

       430        440        450        460        470        480 
AGDAARRVQR RVRDGGLDPA AAEALLQAAG QPAGPGPRQG ALTAREAEVL CLVAQGATNK 

       490        500        510        520 
EIAARLVISE KTARNHVERT YAKIGVSNRV AASLYALEHG LLGRLV

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References

[1]"Complete sequence of chromosome of Mycobacterium sp. MCS."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Martinez M., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E. expand/collapse author list , Miller C.D., Hughes J.E., Anderson A.J., Sims R.C., Richardson P.
Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

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Cross-references

Sequence databases

CP000384 Genomic DNA. Translation: ABG07024.1.
RefSeqYP_638080.1.

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID4109749.
GenomeReviewsGene locus Mmcs_0908 in contig CP000384_GR.
KEGGmmc:Mmcs_0908.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMQ1BDL0.

Enzyme and pathway databases

BioCycMSP164756:MMCS_0908-MON.

Family and domain databases

InterProIPR000792. HTH_LuxR.
IPR003607. Met-dep_phosphohydro_HD.
IPR006674. Met-dep_phosphohydro_HD_sub.
IPR011991. Wing_hlx_DNA_bd.
[Graphical view]
Gene3DG3DSA:1.10.10.10. Wing_hlx_DNA_bd. 1 hit.
PfamPF00196. GerE. 1 hit.
PF01966. HD. 1 hit.
[Graphical view]
PRINTSPR00038. HTHLUXR.
ProDomPD000307. HTH_LuxR. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SMARTSM00471. HDc. 1 hit.
SM00421. HTH_LUXR. 1 hit.
[Graphical view]
PROSITEPS50043. HTH_LUXR_2. 1 hit.
[Graphical view]

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Entry information

Entry nameQ1BDL0_MYCSS
AccessionPrimary (citable) accession number: Q1BDL0
Entry history
Integrated into UniProtKB/TrEMBL: July 11, 2006
Last sequence update: July 11, 2006
Last modified: October 14, 2008
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information