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Reviewed, UniProtKB/Swiss-Prot P15129 (CP4B1_RAT)

Last modified September 2, 2008. Version 68. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Cytochrome P450 4B1
    EC=1.14.14.1
Alternative name(s):
    CYPIVB1
    P450-isozyme 5
    P450 L-2
Gene names
Name: Cyp4b1
Synonyms: Cyp4b-1
OrganismRattus norvegicus (Rat)
Taxonomic identifier10116 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Protein attributes

Sequence length511 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at protein level.

General annotation (Comments)

Function

Cytochromes P450 are a group of heme-thiolate monooxygenases. In liver microsomes, this enzyme is involved in an NADPH-dependent electron transport pathway. It oxidizes a variety of structurally unrelated compounds, including steroids, fatty acids, and xenobiotics.

Catalytic activity

RH + reduced flavoprotein + O(2) = ROH + oxidized flavoprotein + H(2)O.

Cofactor

Heme group By similarity.

Subcellular location

Endoplasmic reticulum membrane; Peripheral membrane protein. Microsome membrane; Peripheral membrane protein.

Induction

P450 can be induced to high levels in liver and other tissues by various foreign compounds, including drugs, pesticides, and carcinogens.

Sequence similarities

Belongs to the cytochrome P450 family.

Ontologies

Keywords

   Cellular componentEndoplasmic reticulum
Membrane
Microsome
   LigandHeme
Iron
Metal-binding
   Molecular functionMonooxygenase
Oxidoreductase
   Technical termDirect protein sequencing

Gene Ontology (GO)

   Cellular componentendoplasmic reticulum membrane

Inferred from electronic annotation. Source: UniProtKB-SubCell

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical view

Molecule processing

Initiator methionine11Removed
Chain2 – 511510Cytochrome P450 4B1

Sites

Metal binding4531Iron (heme axial ligand) By similarity
Binding site3151Heme (covalent; via 1 link) By similarity

Sequences

Sequence LengthMass (Da)Tools
P15129-1 [UniParc].

Last modified January 23, 2007. Version 3.
Checksum: CEAAFB5BE2ED9944

FASTA51158,936
        10         20         30         40         50         60 
MVLNFLSPSL SRLGLWASVV ILMVIVLKLF SLLLRRQKLA RAMDSFPGPP THWLFGHALE 

        70         80         90        100        110        120 
IQKLGSLDKV VSWAQQFPHA HPLWFGQFVG FLNIYEPDYA KAVYSRGDPK AADVYDFFLQ 

       130        140        150        160        170        180 
WIGKGLLVLD GPKWFQHRKL LTPGFHYDVL KPYVAIFAES TRMMLDKWEK KASENKSFDI 

       190        200        210        220        230        240 
FCDVGHMALD TLMKCTFGKG DSGLGHRDNS YYLAVSDLTL LMQQRIDSFQ YHNDFIYWLT 

       250        260        270        280        290        300 
PHGRRFLRAC KIAHDHTDEV IRQRKAALQD EKERKKIQQR RHLDFLDILL GVRDESGIKL 

       310        320        330        340        350        360 
SDAELRAEVD TFMFEGHDTT TSGISWFLYC MALYPEHQQL CREEVRGILG DQDSFQWDDL 

       370        380        390        400        410        420 
AKMTYLTMCM KECFRLYPPV PQVYRQLNKP VTFVDGRSLP AGSLISLHIY ALHRNSTVWP 

       430        440        450        460        470        480 
DPEVFDPLRF SPENAAGRHP FAFMPFSAGP RNCIGQQFAM NEMKVVTALC LLRFEFSLDP 

       490        500        510 
SKMPIKVPQL ILRSKNGIHL YLKPLASRSG K 

« Hide

References

« Hide 'large scale' references
[1]"Primary structures of cytochrome P-450 isozyme 5 from rabbit and rat and regulation of species-dependent expression and induction in lung and liver: identification of cytochrome P-450 gene subfamily IVB."
Gasser R., Philpot R.M.
Mol. Pharmacol. 35:617-625(1989) [PubMed: 2725471] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA].
[2]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Lung.
[3]"Purification and characterization of rat pulmonary cytochrome P-450."
Imaoka S., Funae Y.
J. Biochem. 108:33-36(1990) [PubMed: 2229008] [Abstract]
Cited for: PROTEIN SEQUENCE OF 2-11.
Tissue: Lung.

Cross-references

Sequence databases

M29853 mRNA. Translation: AAA41778.1.
BC074012 mRNA. Translation: AAH74012.1.
PIRB40164.
RefSeqNP_058695.2.
UniGeneRn.86651

3D structure databases

HSSPHSSP built from PDB template 1JME based on UniProtKB P14779.
ModBaseSearch...

Genome annotation databases

EnsemblENSRNOG00000009741. Rattus norvegicus. [Contig view]
GeneID24307.
KEGGrno:24307.

Organism-specific databases

RGD2480. Cyp4b1.

Phylogenomic databases

HOVERGENP15129.

Gene expression databases

ArrayExpressP15129.
GermOnlineENSRNOG00000009741. Rattus norvegicus.

Family and domain databases

InterProIPR001128. Cyt_P450.
IPR002401. Cyt_P450_E_grp-I.
[Graphical view]
Gene3DG3DSA:1.10.630.10. Cyt_P450. 1 hit.
PANTHERPTHR19383. Cyt_P450. 1 hit.
PfamPF00067. p450. 1 hit.
[Graphical view]
PRINTSPR00463. EP450I.
PR00385. P450.
PROSITEPS00086. CYTOCHROME_P450. 1 hit.
[Graphical view]
ProDomP15129.
[Graphical view] [Entries sharing at least one domain]
BLOCKSSearch...

Other Resources

ProtoNetSearch...

Entry information

Entry nameCP4B1_RAT
AccessionPrimary (citable) accession number: P15129
Entry history
Integrated into UniProtKB/Swiss-Prot: April 1, 1990
Last sequence update: January 23, 2007
Last modified: September 2, 2008
This is version 68 of the entry and version 3 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHPI (Human Proteome Initiative)

Relevant documents

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents