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Unreviewed, UniProtKB/TrEMBL A0L6C9 (A0L6C9_MAGSM)

Last modified July 22, 2008. Version 11. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information

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Names and origin

Protein namesSubmitted name:
    Diguanylate cyclase/phosphodiesterase EMBL ABK43522.1
Gene names
Ordered Locus Names: Mmc1_1004
OrganismMagnetococcus sp. (strain MC-1) [Complete proteome] [HAMAP]
Taxonomic identifier156889 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Magnetococcus

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Protein attributes

Sequence length555 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existencePredicted.

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Ontologies

Keywords

   Technical termComplete proteome

Gene Ontology (GO)

   Biological processsignal transduction

Inferred from electronic annotation. Source: InterPro

   Molecular functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

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Sequences

Sequence LengthMass (Da)Tools
A0L6C9-1 [UniParc].

Last modified December 12, 2006. Version 1.
Checksum: F6E315BD6BE47795

FASTA55562,159
        10         20         30         40         50         60 
MDFSFDGQHL LHHLADGIII HEQDMILYAN EIARIMLGTE IHTDLTQSLF SLRIDPTCRE 

        70         80         90        100        110        120 
AWLHNGANHS HEADRVKLVD LKLLPEAKPF THVEALTIPF QGNERLLVTT LRDISEKKRQ 

       130        140        150        160        170        180 
EERIRHQANY DALTGLPNRG LFLDRLKLEL ARAKRTDVRV AVMFIDLDRF KWVNDTLGHA 

       190        200        210        220        230        240 
AGDDLLREAS KRLLSCHRQS DTVARMGGDE FTVILPDMAR GPHAERVAAQ ILEQLAAPFT 

       250        260        270        280        290        300 
LEGQEVTISG SVGVTIFPDD ADNLDDLLKN ADTAMYRAKS QGRNAYRFYT PDMHAEAMAR 

       310        320        330        340        350        360 
MALERELSSA VEDQELALCY QPIVDLNTNR IAGAEALLRW NHPTLGAVSP EVFIPIAEEM 

       370        380        390        400        410        420 
GLIAQITEWA VREACTQACQ WRSQYGTAKD FFISVNLTCT RCRELSTDDK IPSILAETQL 

       430        440        450        460        470        480 
PPHALVLEVT ETILGEDPPK AMAMLNHLKQ IGVRLWLDDF GTGSSSLSVL RNLPVCGVKI 

       490        500        510        520        530        540 
DRTFVPDALN DKEAEVLVTT IINMGRSLNR ILIGEGVETE AQRLYLEGKG VQLAQGYFFG 

       550 
KPCSAAEFPD QFFDH

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References

[1]"Complete sequence of Magnetococcus sp. MC-1."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Kiss H., Goodwin L.A., Brettin T., Bruce D., Han C., Tapia R., Gilna P. expand/collapse author list , Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Richardson P.
Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

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Cross-references

Sequence databases

CP000471 Genomic DNA. Translation: ABK43522.1.
RefSeqYP_864928.1.

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID4481169.
GenomeReviewsGene locus Mmc1_1004 in contig CP000471_GR.
KEGGmgm:Mmc1_1004.
NMPDRfig|156889.1.peg.2657.

Organism-specific databases

CMRSearch...

Family and domain databases

InterProIPR001633. EAL.
IPR000160. GGDEF.
IPR000014. PAS.
[Graphical view]
PfamPF00563. EAL. 1 hit.
PF00990. GGDEF. 1 hit.
[Graphical view]
SMARTSM00267. DUF1. 1 hit.
SM00052. DUF2. 1 hit.
SM00091. PAS. 1 hit.
[Graphical view]
TIGRFAMsTIGR00254. GGDEF. 1 hit.
PROSITEPS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
[Graphical view]

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Entry information

Entry nameA0L6C9_MAGSM
AccessionPrimary (citable) accession number: A0L6C9
Entry history
Integrated into UniProtKB/TrEMBL: December 12, 2006
Last sequence update: December 12, 2006
Last modified: July 22, 2008
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information