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yeast6.txt

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        UniProt - Swiss-Prot Protein Knowledgebase
        SIB Swiss Institute of Bioinformatics; Geneva, Switzerland
        European Bioinformatics Institute (EBI); Hinxton, United Kingdom
        Protein Information Resource (PIR); Washington DC, USA
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Description: Yeast (Saccharomyces cerevisiae) chromosome 6: entries and
             gene names
Name:        yeast6.txt
Release:     2017_11 of 22-Nov-2017

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======================================
Yeast chromosome 6 open reading frames
======================================

Reference for complete sequence:

RX   PubMed=7670463
RA   Murakami Y., Naitou M., Hagiwara H., Shibata T., Ozawa M., Sasanuma
RA   S., Sasanuma M., Tsuchiya Y., Soeda E., Yokoyama K., Yamazaki M.,
RA   Tashiro H., Eki T.
RT   Analysis of the nucleotide sequence of chromosome VI from
RT   Saccharomyces cerevisiae.
RL   Nat. Genet. 10:261-268(1995)
RX   PubMed=24374639
RA   Engel S.R., Dietrich F.S., Fisk D.G., Binkley G., Balakrishnan R.,
RA   Costanzo M.C., Dwight S.S., Hitz B.C., Karra K., Nash R.S., Weng S.,
RA   Wong E.D., Lloyd P., Skrzypek M.S., Miyasato S.R., Simison M., Cherry
RA   J.M.
RT   The reference genome sequence of Saccharomyces cerevisiae: Then and
RT   now.
RL   G3 (Bethesda) 4:389-398(2014)


Size of the chromosome: 270 Kb.
Total number of ORFs currently in Swiss-Prot: 130

=====================
ORF code nomenclature
=====================

YX[L|R]ddd[w|c]

Y      =  Yeast
X      =  Letter representing the chromosome
L | R  =  'L' is for Left arm; 'R' is for Right arm
ddd    =  ORF number on the left or right arm
c | w  =  'c' is for complementary strand; 'w' is for Watson strand


________________________ ___________ __________ ____ ____________________________________________________________ _______________________________________ ______________________________
Ordered locus name       Swiss-Prot             Size Gene name and synonyms                                       ORF code synonyms                       Evidence
                         entry name  AC         a.a.
________________________ ___________ __________ ____ ____________________________________________________________ _______________________________________ ______________________________
YFL068W                  YFG8_YEAST      P0CX99  160                                                                                                      Inferred from homology      
YFL067W                  YFG7_YEAST      P43537  175                                                                                                      Evidence at protein level   
YFL066C                  YFG6_YEAST      P43538  392                                                                                                      Evidence at transcript level
YFL065C                  YFG5_YEAST      P43539  102                                                                                                      Predicted                   
YFL064C                  YFG4_YEAST      P43540  174                                                                                                      Predicted                   
YFL063W                  YFG3_YEAST      P43541  151                                                                                                      Uncertain                   
YFL062W                  COS4_YEAST      P43542  379 COS4                                                                                                 Inferred from homology      
YFL061W                  DDI2_YEAST      P0CH63  225 DDI2                                                                                                 Evidence at protein level   
YFL060C                  SNO3_YEAST      P43544  222 SNO3                                                                                                 Evidence at protein level   
YFL059W                  SNZ3_YEAST      P43545  298 SNZ3                                                                                                 Evidence at transcript level
YFL058W                  THI5_YEAST      P43534  340 THI5; MOL2                                                                                           Evidence at protein level   
YFL057C                  YFL57_YEAST     P43546  152                                                                                                      Uncertain                   
YFL056C                  AAD6_YEAST      P43547  212 AAD6                                                                                                 Uncertain                   
YFL055W                  AGP3_YEAST      P43548  558 AGP3                                                                                                 Evidence at protein level   
YFL054C                  YFF4_YEAST      P43549  646                                                                                                      Evidence at protein level   
YFL053W                  DAK2_YEAST      P43550  591 DAK2                                                                                                 Inferred from homology      
YFL052W                  YFF2_YEAST      P43551  465                                                                                                      Inferred from homology      
YFL051C                  YFF1_YEAST      P43552  160                                                                                                      Evidence at protein level   
YFL050C                  ALR2_YEAST      P43553  858 ALR2                                                                                                 Evidence at protein level   
YFL049W                  SWP82_YEAST     P43554  623 SWP82                                                                                                Evidence at protein level   
YFL048C                  EMP47_YEAST     P43555  445 EMP47                                                                                                Evidence at protein level   
YFL047W                  RGD2_YEAST      P43556  714 RGD2                                                                                                 Evidence at protein level   
YFL046W                  FMP32_YEAST     P43557  207 FMP32                                                                                                Evidence at protein level   
YFL045C                  PMM_YEAST       P07283  254 SEC53; ALG4                                                                                          Evidence at protein level   
YFL044C                  OTU1_YEAST      P43558  301 OTU1                                                                                                 Evidence at protein level   
YFL042C                  LAM5_YEAST      P43560  674 LAM5; LTC2                                                                                           Evidence at protein level   
YFL041W-A                YF041_YEAST     Q3E817   63                                                                                                      Predicted                   
YFL041W                  FET5_YEAST      P43561  622 FET5                                                                                                 Evidence at protein level   
YFL040W                  YFE0_YEAST      P43562  540                                                                                                      Evidence at protein level   
YFL039C                  ACT_YEAST       P60010  375 ACT1; ABY1; END7                                                                                     Evidence at protein level   
YFL038C                  YPT1_YEAST      P01123  206 YPT1; YP2                                                                                            Evidence at protein level   
YFL037W                  TBB_YEAST       P02557  457 TUB2                                                                                                 Evidence at protein level   
YFL036W                  RPOM_YEAST      P13433 1351 RPO41                                                                                                Inferred from homology      
YFL034W                  YFD4_YEAST      P43564 1073                                                                                                      Evidence at protein level   
YFL034C-B                MOB2_YEAST      P43563  287 MOB2                                                         YFL035C; YFL035C-A                      Evidence at protein level   
YFL034C-A                RL22B_YEAST     P56628  122 RPL22B                                                       YFL034BC                                Evidence at protein level   
YFL033C                  RIM15_YEAST     P43565 1770 RIM15; TAK1                                                                                          Evidence at protein level   
YFL032W                  YFD2_YEAST      P43566  106                                                                                                      Uncertain                   
YFL031W                  HAC1_YEAST      P41546  238 HAC1; ERN4; IRE15; IRE2                                                                              Evidence at protein level   
YFL031C-A                YF030_YEAST     Q8TGU3   33                                                              YFL030C-A                               Uncertain                   
YFL030W                  AGX1_YEAST      P43567  385 AGX1                                                                                                 Evidence at protein level   
YFL029C                  CAK1_YEAST      P43568  368 CAK1; CIV1                                                                                           Evidence at protein level   
YFL028C                  CAF16_YEAST     P43569  289 CAF16                                                                                                Evidence at protein level   
YFL027C                  GYP8_YEAST      P43570  497 GYP8                                                                                                 Evidence at protein level   
YFL026W                  STE2_YEAST      D6VTK4  431 STE2                                                                                                 Evidence at protein level   
YFL025C                  BST1_YEAST      P43571 1029 BST1                                                                                                 Evidence at protein level   
YFL024C                  EPL1_YEAST      P43572  832 EPL1                                                                                                 Evidence at protein level   
YFL023W                  BUD27_YEAST     P43573  796 BUD27; URI                                                                                           Evidence at protein level   
YFL022C                  SYFA_YEAST      P15625  503 FRS2                                                                                                 Evidence at protein level   
YFL021W                  GAT1_YEAST      P43574  510 GAT1                                                                                                 Evidence at protein level   
YFL021C-A                YF021_YEAST A0A023PXK7  284                                                                                                      Uncertain                   
YFL020C                  PAU5_YEAST      P43575  122 PAU5                                                                                                 Inferred from homology      
YFL019C                  YFB9_YEAST      P43576  117                                                                                                      Predicted                   
YFL018C                  DLDH_YEAST      P09624  499 LPD1; DHLP1                                                                                          Evidence at protein level   
YFL017W-A                RUXG_YEAST      P40204   77 SMX2; SNP2                                                   YFL017Bw                                Evidence at protein level   
YFL017C                  GNA1_YEAST      P43577  159 GNA1; PAT1                                                                                           Evidence at protein level   
YFL016C                  MDJ1_YEAST      P35191  511 MDJ1                                                                                                 Evidence at protein level   
YFL015W-A                YF015_YEAST A0A023PXD9  105                                                                                                      Uncertain                   
YFL015C                  YFB5_YEAST      P43578  164                                                                                                      Predicted                   
YFL014W                  HSP12_YEAST     P22943  109 HSP12; GLP1; HOR5                                                                                    Evidence at protein level   
YFL013W-A                YF013_YEAST     Q03187  267                                                                                                      Uncertain                   
YFL013C                  IES1_YEAST      P43579  692 IES1                                                                                                 Evidence at protein level   
YFL012W-A                YFL12_YEAST     Q03186  124                                                                                                      Uncertain                   
YFL012W                  YFB2_YEAST      P43580  148                                                                                                      Predicted                   
YFL011W                  HXT10_YEAST     P43581  546 HXT10                                                                                                Evidence at protein level   
YFL010W-A                AUA1_YEAST      P32450   94 AUA1                                                         YFL010BW                                Evidence at transcript level
YFL010C                  WWM1_YEAST      P43582  211 WWM1                                                                                                 Evidence at protein level   
YFL009W                  CDC4_YEAST      P07834  779 CDC4                                                                                                 Evidence at protein level   
YFL008W                  SMC1_YEAST      P32908 1225 SMC1; CHL10                                                                                          Evidence at protein level   
YFL007W                  BLM10_YEAST     P43583 2143 BLM10; BLM3                                                  YFL006W                                 Evidence at protein level   
YFL005W                  SEC4_YEAST      P07560  215 SEC4; SRO6                                                                                           Evidence at protein level   
YFL004W                  VTC2_YEAST      P43585  828 VTC2; PHM1                                                                                           Evidence at protein level   
YFL003C                  MSH4_YEAST      P40965  878 MSH4                                                                                                 Evidence at protein level   
YFL002W-B                YF21A_YEAST     P0CX61  438 TY2A-F; YFLWTy2-1 GAG                                        F006                                    Inferred from homology      
YFL002W-A                YF21B_YEAST     P0CX63 1770 TY2B-F; YFLWTy2-1 POL                                        FN01                                    Inferred from homology      
YFL002C                  SPB4_YEAST      P25808  606 SPB4                                                                                                 Evidence at protein level   
YFL001W                  PUS3_YEAST      P31115  442 DEG1; HRM3; PUS3                                                                                     Evidence at protein level   
YFR001W                  LOC1_YEAST      P43586  204 LOC1                                                                                                 Evidence at protein level   
YFR002W                  NIC96_YEAST     P34077  839 NIC96                                                                                                Evidence at protein level   
YFR003C                  YPI1_YEAST      P43587  155 YPI1                                                                                                 Evidence at protein level   
YFR004W                  RPN11_YEAST     P43588  306 RPN11; MPR1                                                                                          Evidence at protein level   
YFR005C                  SAD1_YEAST      P43589  448 SAD1                                                                                                 Evidence at protein level   
YFR006W                  YFH6_YEAST      P43590  535                                                                                                      Evidence at protein level   
YFR007W                  YFH7_YEAST      P43591  353 YFH7; AIM12                                                                                          Evidence at protein level   
YFR008W                  FAR7_YEAST      P43592  221 FAR7                                                                                                 Evidence at protein level   
YFR009W                  GCN20_YEAST     P43535  752 GCN20                                                                                                Evidence at protein level   
YFR009W-A                YF009_YEAST     P0C5M9   85                                                                                                      Evidence at protein level   
YFR010W                  UBP6_YEAST      P43593  499 UBP6                                                                                                 Evidence at protein level   
YFR010W-A                YF010_YEAST     P0C5N0   62                                                                                                      Evidence at protein level   
YFR011C                  MIC19_YEAST     P43594  170 MIC19; AIM13; MCS19                                                                                  Evidence at protein level   
YFR012W                  DCV1_YEAST      P43595  202 DCV1                                                                                                 Inferred from homology      
YFR012W-A                YF012_YEAST     Q3E838   28                                                                                                      Predicted                   
YFR013W                  IOC3_YEAST      P43596  787 IOC3                                                                                                 Evidence at protein level   
YFR014C                  KCC1_YEAST      P27466  446 CMK1                                                                                                 Evidence at protein level   
YFR015C                  GYS1_YEAST      P23337  708 GSY1                                                                                                 Evidence at protein level   
YFR016C                  YFI6_YEAST      P43597 1233                                                                                                      Evidence at protein level   
YFR017C                  IGD1_YEAST      P43598  195 IGD1                                                                                                 Evidence at protein level   
YFR018C                  YFI8_YEAST      P43599  363                                                                                                      Evidence at protein level   
YFR019W                  FAB1_YEAST      P34756 2278 FAB1                                                                                                 Evidence at protein level   
YFR020W                  YFJ0_YEAST      P43600  232                                                                                                      Evidence at protein level   
YFR021W                  ATG18_YEAST     P43601  500 ATG18; AUT10; CVT18; NMR1; SVP1                                                                      Evidence at protein level   
YFR022W                  ROG3_YEAST      P43602  733 ROG3                                                                                                 Evidence at protein level   
YFR023W                  PES4_YEAST      P39684  611 PES4                                                                                                 Predicted                   
YFR024C-A                LSB3_YEAST      P43603  459 LSB3                                                         YFR024C                                 Evidence at protein level   
YFR025C                  HIS9_YEAST      P38635  335 HIS2                                                                                                 Evidence at protein level   
YFR026C                  ULI1_YEAST      P43604  169 ULI1                                                                                                 Evidence at protein level   
YFR027W                  ECO1_YEAST      P43605  281 ECO1; CTF7                                                                                           Evidence at protein level   
YFR028C                  CDC14_YEAST     Q00684  551 CDC14; OAF3                                                                                          Evidence at protein level   
YFR029W                  PTR3_YEAST      P43606  678 PTR3; APF3; SSY3                                                                                     Evidence at protein level   
YFR030W                  MET10_YEAST     P39692 1035 MET10                                                                                                Evidence at protein level   
YFR031C                  SMC2_YEAST      P38989 1170 SMC2                                                                                                 Evidence at protein level   
YFR031C-A                RL2A_YEAST      P0CX45  254 RPL2A; RPL5B                                                 YFR031BC                                Evidence at protein level   
YFR032C                  RRT5_YEAST      P43607  289 RRT5                                                                                                 Evidence at protein level   
YFR032C-A                RL29_YEAST      P05747   59 RPL29; YL43                                                  YFR032BW                                Evidence at protein level   
YFR032C-B                YF032_YEAST     Q8TGU2   87                                                                                                      Predicted                   
YFR033C                  QCR6_YEAST      P00127  147 QCR6; UCR6                                                                                           Evidence at protein level   
YFR034C                  PHO4_YEAST      P07270  312 PHO4                                                                                                 Evidence at protein level   
YFR034W-A                YF034_YEAST     Q8TGR2   95                                                                                                      Uncertain                   
YFR035C                  YFK5_YEAST      P43608  114                                                                                                      Predicted                   
YFR036W                  CDC26_YEAST     P14724  124 CDC26; HIT3; SCD26                                                                                   Evidence at protein level   
YFR036W-A                YF036_YEAST A0A023PZD0  216                                                                                                      Uncertain                   
YFR037C                  RSC8_YEAST      P43609  557 RSC8; SWH3                                                                                           Evidence at protein level   
YFR038W                  IRC5_YEAST      P43610  853 IRC5                                                                                                 Evidence at protein level   
YFR039C                  OSW7_YEAST      P43611  510 OSW7                                                                                                 Evidence at protein level   
YFR040W                  SA155_YEAST     P43612 1002 SAP155                                                                                               Evidence at protein level   
YFR041C                  ERJ5_YEAST      P43613  295 ERJ5                                                                                                 Evidence at protein level   
YFR042W                  KEG1_YEAST      P43614  200 KEG1                                                                                                 Evidence at protein level   
YFR043C                  IRC6_YEAST      P43615  237 IRC6                                                                                                 Evidence at protein level   
YFR044C                  DUG1_YEAST      P43616  481 DUG1                                                                                                 Evidence at protein level   
YFR045W                  YFL5_YEAST      P43617  309                                                                                                      Inferred from homology      
YFR046C                  CNN1_YEAST      P43618  361 CNN1                                                                                                 Evidence at protein level   
YFR047C                  NADC_YEAST      P43619  295 BNA6; QPT1                                                                                           Evidence at protein level   
YFR048W                  RMD8_YEAST      P43620  662 RMD8                                                                                                 Evidence at protein level   
YFR049W                  RT31_YEAST      P19955  123 YMR31                                                                                                Evidence at protein level   
YFR050C                  PSB7_YEAST      P30657  266 PRE4                                                                                                 Evidence at protein level   
YFR051C                  COPD_YEAST      P43621  546 RET2                                                                                                 Evidence at protein level   
YFR052C-A                YF052_YEAST A0A023PZH4  101                                                                                                      Uncertain                   
YFR052W                  RPN12_YEAST     P32496  274 RPN12; NIN1                                                                                          Evidence at protein level   
YFR053C                  HXKA_YEAST      P04806  485 HXK1; HKA                                                                                            Evidence at protein level   
YFR054C                  YFM4_YEAST      P43622  192                                                                                                      Evidence at protein level   
YFR055W                  METC_YEAST      P43623  340 IRC7                                                                                                 Evidence at protein level   
YFR056C                  YFM6_YEAST      P43624  122                                                                                                      Uncertain                   
YFR057W                  YFM7_YEAST      P43625  151                                                                                                      Predicted                   

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