yeast1.txt
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UniProt - Swiss-Prot Protein Knowledgebase
SIB Swiss Institute of Bioinformatics; Geneva, Switzerland
European Bioinformatics Institute (EBI); Hinxton, United Kingdom
Protein Information Resource (PIR); Washington DC, USA
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Description: Yeast (Saccharomyces cerevisiae) chromosome 1: entries and
gene names
Name: yeast1.txt
Release: 2013_06 of 29-May-2013
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Yeast chromosome 1 open reading frames
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Reference for complete sequence:
RX PubMed=7731988
RA Bussey H., Kaback D.B., Zhong W.-W., Vo D.H., Clark M.W., Fortin N.,
RA Hall J., Ouellette B.F.F., Keng T., Barton A.B., Su Y., Davies C.J.,
RA Storms R.K.
RT The nucleotide sequence of chromosome I from Saccharomyces cerevisiae.
RL Proc. Natl. Acad. Sci. U.S.A. 92:3809-3813(1995)
Size of the chromosome: 230 Kb.
Total number of ORFs currently in Swiss-Prot: 114
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ORF code nomenclature
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YX[L|R]ddd[w|c]
Y = Yeast
X = Letter representing the chromosome
L | R = 'L' is for Left arm; 'R' is for Right arm
ddd = ORF number on the left or right arm
c | w = 'c' is for complementary strand; 'w' is for Watson strand
________________________ ___________ ______ ____ ____________________________________________________________ _______________________________________ ______________________________
Ordered locus name Swiss-Prot Size Gene name and synonyms ORF code synonyms Evidence
entry name AC a.a.
________________________ ___________ ______ ____ ____________________________________________________________ _______________________________________ ______________________________
YAL069W YA069_YEAST O13588 104 Uncertain
YAL068W-A YAG8_YEAST Q8TGK7 84 Uncertain
YAL068C PAU8_YEAST P0CE92 120 PAU8 Evidence at transcript level
YAL067W-A YA067_YEAST Q8TGK6 75 Evidence at transcript level
YAL067C SEO1_YEAST P39709 593 SEO1 Evidence at protein level
YAL066W YAG6_YEAST P39710 102 Uncertain
YAL065C YA065_YEAST O13511 128 Evidence at transcript level
YAL064W-B YA64B_YEAST O13512 126 Evidence at protein level
YAL064W YAG4_YEAST P39711 94 Predicted
YAL064C-A TDA8_YEAST Q6B2U8 126 TDA8 Inferred from homology
YAL063C-A YA063_YEAST Q3E791 96 Evidence at protein level
YAL063C FLO9_YEAST P39712 1322 FLO9 Inferred from homology
YAL062W DHE5_YEAST P39708 457 GDH3 FUN51 Evidence at protein level
YAL061W BDH2_YEAST P39713 417 BDH2 FUN50 Evidence at protein level
YAL060W BDH1_YEAST P39714 382 BDH1; BDH FUN49 Evidence at protein level
YAL059W ECM1_YEAST P39715 212 ECM1; SIM1 Evidence at protein level
YAL058W CALX_YEAST P27825 502 CNE1 FUN48 Evidence at protein level
YAL056W GPB2_YEAST P39717 880 GPB2; KRH1 Evidence at protein level
YAL056C-A YA056_YEAST O13513 116 YAL058C-A Uncertain
YAL055W PEX22_YEAST P39718 180 PEX22 Evidence at protein level
YAL054C ACS1_YEAST Q01574 713 ACS1 FUN44 Evidence at protein level
YAL053W FLC2_YEAST P39719 783 FLC2 Evidence at protein level
YAL051W OAF1_YEAST P39720 1047 OAF1; YAF1 FUN43 Evidence at protein level
YAL049C AIM2_YEAST P39721 246 AIM2 Evidence at protein level
YAL048C GEM1_YEAST P39722 662 GEM1 Evidence at protein level
YAL047C SPC72_YEAST P39723 622 SPC72; LDB4; SPI6 FUN42 Evidence at protein level
YAL046C AIM1_YEAST P39724 118 AIM1 Evidence at protein level
YAL045C YAE5_YEAST P39725 102 Uncertain
YAL044W-A YA044_YEAST Q3E793 110 Evidence at protein level
YAL044C GCSH_YEAST P39726 170 GCV3 FUN40 Evidence at protein level
YAL043C PTA1_YEAST Q01329 785 PTA1 FUN39 Evidence at protein level
YAL042W ERV46_YEAST P39727 415 ERV46 FUN9 Evidence at protein level
YAL042C-A YA042_YEAST O13514 125 YAL043C-A Uncertain
YAL041W CDC24_YEAST P11433 854 CDC24; CLS4 Evidence at protein level
YAL040C CG13_YEAST P13365 580 CLN3; DAF1; WHI1 FUN10 Evidence at protein level
YAL039C CCHL_YEAST P06182 269 CYC3 Evidence at protein level
YAL038W KPYK1_YEAST P00549 500 CDC19; PYK1 Evidence at protein level
YAL037W YAD7_YEAST P39728 267 Predicted
YAL037C-B YA37B_YEAST Q8TGR8 324 YAL038C-A Uncertain
YAL037C-A YA037_YEAST Q3E741 30 Predicted
YAL036C RBG1_YEAST P39729 369 RBG1; FUN11 Evidence at protein level
YAL035W IF2P_YEAST P39730 1002 FUN12 Evidence at protein level
YAL034W-A MTW1_YEAST P39731 289 MTW1; DSN3; NSL2 YAL034AW Evidence at protein level
YAL034C-B YA034_YEAST O13515 117 YAL035C-A Uncertain
YAL034C FUN19_YEAST P28003 413 FUN19 Evidence at protein level
YAL033W POP5_YEAST P28005 173 POP5 FUN53 Evidence at protein level
YAL032C PRP45_YEAST P28004 379 PRP45; FUN20 Evidence at protein level
YAL031C GIP4_YEAST P39732 760 GIP4; FUN21 Evidence at protein level
YAL030W SNC1_YEAST P31109 117 SNC1 Evidence at protein level
YAL029C MYO4_YEAST P32492 1471 MYO4; SHE1 FUN22 Evidence at protein level
YAL028W HPH2_YEAST P39734 528 FRT2; HPH2 Evidence at protein level
YAL027W SAW1_YEAST P39735 261 SAW1 Evidence at protein level
YAL026C ATC3_YEAST P39524 1355 DRS2 FUN38 Evidence at protein level
YAL025C MAK16_YEAST P10962 306 MAK16 Evidence at protein level
YAL024C LTE1_YEAST P07866 1435 LTE1; EIS4; MSI2 Evidence at protein level
YAL023C PMT2_YEAST P31382 759 PMT2 FUN25 Evidence at protein level
YAL022C FUN26_YEAST P31381 517 FUN26 Evidence at protein level
YAL021C CCR4_YEAST P31384 837 CCR4 FUN27 Evidence at protein level
YAL020C ATS1_YEAST P31386 333 ATS1 FUN28; YAL006 Evidence at protein level
YAL019W FUN30_YEAST P31380 1131 FUN30 YAL001 Evidence at protein level
YAL018C YAB8_YEAST P31379 325 YAL003 Evidence at protein level
YAL017W PSK1_YEAST P31374 1356 PSK1 FUN31; YAL002 Evidence at protein level
YAL016W 2AAA_YEAST P31383 635 TPD3 FUN32 Evidence at protein level
YAL016C-B YA016_YEAST P0C1V3 61 Uncertain
YAL015C NTG1_YEAST P31378 399 NTG1 FUN33 Evidence at protein level
YAL014C STX8_YEAST P31377 255 SYN8; UIP2 FUN34 Evidence at protein level
YAL013W DEP1_YEAST P31385 405 DEP1; FUN54 Evidence at protein level
YAL012W CYS3_YEAST P31373 394 CYS3; CYI1; STR1 FUN35 Evidence at protein level
YAL011W SWC3_YEAST P31376 625 SWC3; FUN36; SWC1 Evidence at protein level
YAL010C MDM10_YEAST P18409 493 MDM10 FUN37 Evidence at protein level
YAL009W SPO7_YEAST P18410 259 SPO7 Evidence at protein level
YAL008W FUN14_YEAST P18411 198 FUN14 Evidence at protein level
YAL007C ERP2_YEAST P39704 215 ERP2 FUN54 Evidence at protein level
YAL005C HSP71_YEAST P10591 642 SSA1 Evidence at protein level
YAL004W YAA4_YEAST P39703 215 Uncertain
YAL003W EF1B_YEAST P32471 206 EFB1; TEF5 Evidence at protein level
YAL002W VPS8_YEAST P39702 1274 VPS8; VPT8 FUN15 Evidence at protein level
YAL001C TFC3_YEAST P34111 1160 TFC3; TSV115 FUN24 Evidence at protein level
YAR002C-A ERP1_YEAST Q05359 219 ERP1 YAR002A Evidence at protein level
YAR002W NUP60_YEAST P39705 539 NUP60; FUN17 Evidence at protein level
YAR003W SWD1_YEAST P39706 426 SWD1; CPS50; SAF49 FUN16 Evidence at protein level
YAR007C RFA1_YEAST P22336 621 RFA1; BUF2; RPA1 FUN3 Evidence at protein level
YAR008W SEN34_YEAST P39707 275 SEN34 FUN4 Evidence at protein level
YAR009C YA11B_YEAST O13527 1196 TY1B-A; YARCTy1-1 POL Evidence at protein level
YAR010C YA11A_YEAST P0CX57 440 TY1A-A; YARCTy1-1 GAG P9659.6d Evidence at protein level
YAR014C BUD14_YEAST P27637 709 BUD14 FUN2 Evidence at protein level
YAR015W PUR7_YEAST P27616 306 ADE1 Evidence at protein level
YAR018C KIN3_YEAST P22209 435 KIN3; NPK1 FUN52 Inferred from homology
YAR019C CDC15_YEAST P27636 974 CDC15 Evidence at protein level
YAR020C PAU7_YEAST P39545 55 PAU7 Evidence at transcript level
YAR023C YAJ3_YEAST D6VPM8 179 Uncertain
YAR027W UIP3_YEAST P39547 235 UIP3 FUN55 Evidence at protein level
YAR028W YAJ8_YEAST P39548 234 FUN56 Evidence at protein level
YAR029W YAJ9_YEAST P39549 74 FUN57 Evidence at transcript level
YAR030C YAK0_YEAST P39550 113 Uncertain
YAR031W PRM9_YEAST P39551 298 PRM9 FUN58 Evidence at protein level
YAR033W MST28_YEAST P39552 234 MST28 FUN59 Evidence at protein level
YAR035C-A YA035_YEAST Q8TGV0 26 Predicted
YAR035W CACM_YEAST P80235 687 YAT1 Evidence at protein level
YAR042W OSH1_YEAST P35845 1188 SWH1; OSH1 YAR044W Evidence at protein level
YAR047C YAL7_YEAST P39557 106 Uncertain
YAR050W FLO1_YEAST P32768 1537 FLO1; FLO2; FLO4; FLO8 Evidence at protein level
YAR053W YAM3_YEAST P39559 98 Uncertain
YAR060C YAN0_YEAST P0CX88 111 Uncertain
YAR061W YAN1_YEAST P0CX90 67 Evidence at transcript level
YAR062W YAN2_YEAST P0CI66 198 Uncertain
YAR064W YAN4_YEAST P39563 99 Evidence at protein level
YAR066W YA066_YEAST P0CX18 203 Evidence at protein level
YAR068W YAN8_YEAST P39564 161 Predicted
YAR069C YAN9_YEAST P0CX92 97 Evidence at transcript level
YAR070C YAO0_YEAST P39566 99 Uncertain
YAR071W PPAB_YEAST P35842 467 PHO11 Evidence at protein level
YAR073W IMDH1_YEAST P39567 403 IMD1 FUN63 Uncertain
YAR075W YA075_YEAST O42831 157 Uncertain
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