Describes a collection of UniProtKB entries.
Describes a UniProtKB entry.
Describes the names for the protein and parts
thereof.
Equivalent to the flat file DE-line.
Describes names of "domains".
Equivalent to the
flat file DE-line Includes: section.
Describes names of processed products.
Equivalent
to the flat file DE-line Contains: section.
Describes a gene.
Equivalent to the flat file
GN-line.
Describes different types of gene designations.
Equivalent to the flat file GN-line.
Describes the source organism.
Describes the names of the source organism.
Equivalent to the flat file OS-line.
Describes a cross-reference to the NCBI taxonomy
database.
Equivalent to the flat file OX-line.
Describes the lineage of the source organism.
Equivalent to the flat file OC-line.
Describes different types of source organism names.
Describes non-nuclear gene locations (organelles
and plasmids).
Equivalent to the flat file OG-line.
Indicates whether the name of a plasmid is known or
unknown.
Describes a citation and a summary of its content.
Equivalent to the flat file RN-, RP-, RC-, RX-, RG-, RA-, RT- and
RL-lines.
Describes different types of citations.
Equivalent
to the flat file RX-, RG-, RA-, RT- and RL-lines.
Describes the title of a citation.
Equivalent to
the flat file RT-line.
Describes the editors of a book (only used for
books).
Equivalent to part of the flat file RL-line of books.
Describes the authors of a citation.
Equivalent to
the flat file RA-line.
Describes the location (URL) of an online journal
article.
No flat file equivalent.
Describes cross-references to bibliography
databases (MEDLINE, PubMed, AGRICOLA) or other online resources
(DOI).
Equivalent to the flat file RX-line.
Describes the type of a citation.
Describes the name of an (online) journal or book.
Describes the volume of a journal or book.
Describes the first page of an article.
Describes the last page of an article.
Describes the publisher of a book.
Describes the city where a book was published.
Describes the database name of submissions.
Describes a patent number.
Describes the institute where a thesis was made.
Describes the country where a thesis was made.
Describes the authors of a citation when these are
represented by a consortium.
Equivalent to the flat file RG-line.
Groups a citation's scope and source descriptions.
Describes the scope of a citation.
Equivalent to
the flat file RP-line.
Describes the source of the sequence according to
the citation.
Equivalent to the flat file RC-line.
Describes different types of general annotations.
Equivalent to the flat file CC-line.
Used in 'catalytic activity' annotations.
Used in 'cofactor' annotations.
Used in 'subcellular location' annotations.
Used in 'sequence caution' annotations.
Refers to the 'key' attribute of a 'reference'
element.
Used in 'online information' annotations.
Used in 'alternative products' annotations.
Used in 'interaction' annotations.
Used in 'disease' annotations.
Used in 'mass spectrometry' and 'sequence
caution' annotations.
Describes the type of a general annotation.
Equivalent to the flat file CC comment topics (except for
"DATABASE" which is translated to "online information").
Describes the type of sequence location in 'RNA
editing' annotations. Common values are "Not_applicable" and
"Undetermined".
Describes an optional name for an 'online
information'.
Describes the molecular mass in 'mass
spectrometry' annotations.
Describes the error of the mass measurement in
'mass spectrometry' annotations.
Describes the experimental method in 'mass
spectrometry' annotations.
Describes different types of biophysicochemical
properties.
Describes a chemical reaction.
Describes a physiological reaction.
Describes a cofactor.
Describes the subcellular location and optionally
the topology and orientation of a molecule.
Describes the type of events that cause alternative
products.
Describes isoforms in 'alternative products'
annotations.
Describes a database cross-reference.
Equivalent to
the flat file DR-line.
Describes the name of the database.
Describes a unique database identifier.
Describes the evidence for the protein's existence.
Equivalent to the flat file PE-line.
Describes different types of sequence annotations.
Equivalent to the flat file FT-line.
Describes the original sequence in annotations
that describe natural or artifical sequence variations.
Describes the variant sequence in annotations
that describe natural or artifical sequence variations.
Describes the sequence coordinates of the
annotation.
Describes the chemical entity that is bound in
annotations that describe binding sites.
Describes the specific part of a molecule that is
bound in annotations that describe binding sites.
Describes the type of a sequence annotation.
Equivalent to the flat file FT feature keys, but using full terms
instead of acronyms.
Describes a sequence location as either a range
with a begin and end or as a position. The 'sequence' attribute is
only used when the location is not on the canonical sequence
displayed in the current entry.
Describes a ligand.
Describes a ligand part.
Describes a molecule by name or unique identifier.
Describes the evidence for an annotation.
No flat
file equivalent.
Describes the type of an evidence using the
Evidence Code Ontology
(http://www.obofoundry.org/cgi-bin/detail.cgi?id=evidence_code).
A unique key to link annotations (via 'evidence'
attributes) to evidences.
Describes the source of the data using a database
cross-reference (or a 'ref' attribute when the source cannot be
found in a public data source, such as PubMed, and is cited only
within the UniProtKB entry).
Describes the source of the evidence, when it is
not assigned by UniProt, but imported from an external database.