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ngr234.txt

----------------------------------------------------------------------------
        UniProt - Swiss-Prot Protein Knowledgebase
        SIB Swiss Institute of Bioinformatics; Geneva, Switzerland
        European Bioinformatics Institute (EBI); Hinxton, United Kingdom
        Protein Information Resource (PIR); Washington DC, USA
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Description: Rhizobium plasmid pNGR234a: entries and gene names
Name:        ngr234.txt
Release:     2018_05 of 23-May-2018

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The complete genome (536'165 base pairs) of Rhizobium sp. strain NGR234
plasmid pNGR234a has been determined. See:

 [Pubmed: 9163424] [Article from publisher]
 Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A.,
 Perret X.
 Nature 387:394-401(1997).

For a detailed report on the results of plasmid pNGR234a analysis, see:

 http://genome.imb-jena.de/other/cfreiber/pNGR234a2.html


Legends and abbreviations for the table below can be found at the bottom of
this document.

____ _____ ____________________ _____ ________ ___ ______________________________________    _______________________________________
Orf  Gene  Swiss-Prot            Size Function Loc Description                               Other info
name name  Entry name  AC          aa class
____ _____ ____________________ _____ ________ ___ ______________________________________    _______________________________________
y4aA shc   SQHC_SINFN  (P55348)   647 Enz:5    Cy? Pr. squalene-hopene cyclase
y4aB       HPNE_SINFN  (P55349)   417 Enz:1    Cy? Hydroxysqualene dehydroxylase
y4aC       HPND_SINFN  (P55350)   279 Enz:2    Cy? Presqualene diphosphate synthase
y4aD       HPNC_SINFN  (P55351)   292 Enz:?    Cy? Hydroxysqualene synthase                  Sim. to phytoene synthases
y4aF       FCL_SINFN   (P55353)   314 Enz:1    Cy? Pu. NAD-dependent nucleotide sugar
                                                   epimerase/dehydrogenase
y4aG noeL  GM4D_SINFN  (P55354)   351 Enz:4    Cy? GDP-mannose 4,6-dehydratase               NODULATION
y4aH nodZ  NODZ_SINFN  (P55355)   322 Enz:2    Cy? Fucosyltransferase                        NODULATION
y4aI noeK  NOEK_SINFN  (P55356)   474 Enz:5    Cy? Phosphomannomutase                        NODULATION
y4aJ noeJ  NOEJ_SINFN  (P55357)   512 Enz:2    Cy? Mannose-1-P guanylyltransferase           NODULATION
y4aK       Y4AK_SINFN  (P55358)    50 Unknown  Cy?
y4aL nodD1 NODD1_SINFN (P55359)   322 TraReg   Cy  lysR family H-T-H; regulates expression   NODULATION;
                                                   of nodABC                                 High sim. to nodD2
y4aM       Y4AM_SINFN  (P55360)   143 TraReg   Cy? Pu. DNA-binding; cro/C1-type H-T-H
y4aN syrB  SYRB_SINFN  (P55361)   148 TraReg?  Cy? Pr. transcriptional regulator of syrM     SyrB family
y4aO       Y4AO_SINFN  (P55362)   192 Unknown  Cy?                                           Low sim. to y4nF
y4aP mucR  MUCR_SINFN  (P55363)   143 TraReg?  Cy? ros/mucR homolog                          High sim. to y4pD
y4aQ       Y4AQ_SINFN  (P55364)   188 Unknown  Cy?                                           Sim. to y4hP, y4jD & y4qI;
                                                                                             Sim. to Orfs in R.meliloti & A.tumefaciens TI plasmid
y4aR       Y4AR_SINFN  (P55365)   107 Unknown  Cy?
y4aS       Y4AS_SINFN  (P55366)   181 Unknown  Cy?
y4bA       Y4BA_SINFN  (P55368)   694 Unknown  Tm?                                           Id. to y4pH
y4bB       Y4BB_SINFN  (P55369)    88 Unknown  Pe?                                           Id. to y4pI; High sim. to y4oL
y4bC       Y4BC_SINFN  (P55370)   149 Unknown  Cy?                                           Id. to y4pJ; High sim. to y4oM
y4bD       Y4BD_SINFN  (P55371)    89 Unknown  Cy?                                           Id. to y4pK; High sim. to y4oN
y4bF       Y4BF_SINFN  (P55373)   457 Int-Rec  Cy? Pu. transposase                           Sim. to Tpase IS1202; Sim. to y4iG
y4bG       Y4BG_SINFN  (P55374)   271 Unknown  Pe?
y4bH       Y4BH_SINFN  (P55375)    91 Unknown  Tm?
y4bI       Y4BI_SINFN  (P55376)   138 Unknown  Pe?                                           Sim. to H.influenzae HI1631
y4bJ       Y4BJ_SINFN  (P55377)   630 Enz:3?   Tm? Pu. peptidase (S2C family)                Distant member of S2C family
y4bK       Y4BK_SINFN  (P55378)   222 Unknown  Cy?                                           Some sim. to P.aeruginosa PAH cluster Orf1
y4bL       Y4BL_SINFN  (P55379)   516 Int-Rec  Cy? Pu. transposase                           Id. to y4kJ & y4tB; Sim. to y4uI;
                                                                                             Sim. to Tpase IS21/IS1162 family
y4bM       Y4BM_SINFN  (P55380)   263 Int-Rec  Cy? Pu. Tpase-associated ATP-binding protein  Id. to y4kI & y4tA; Sim. to y4iQ, y4nD, y4sD, y4pL & y4uH
                                                                                             Sim. to ATP-binding protein from IS21/IS1162 fam.
y4bN       Y4BN_SINFN  (P55381)   431 Unknown  Cy?
y4bO       Y4BO_SINFN  (P55382)   606 Unknown  Cy?
y4cA       Y4CA_SINFN  (P55383) 11197 Unknown  Cy?                                           Largest protein in pNGR234a
y4cB       Y4CB_SINFN  (P55384)    98 Unknown  Tm?
y4cC       Y4CC_SINFN  (P55385)   517 Unknown  Cy?
y4cD       Y4CD_SINFN  (P55386)   640 Unknown  Cy?
y4cE       Y4CE_SINFN  (P55387)   391 Unknown  Cy?
y4cF       Y4CF_SINFN  (P55388)   380 Unknown  Cy?
y4cG       Y4CG_SINFN  (P55389)   305 Int-Rec  Cy? Pr. DNA invertase 'resolvase-type'
y4cH       Y4CH_SINFN  (P55390)    69 TraReg?  Cy? Pr. cold shock regulator
y4cI       Y4CI_SINFN  (P55391)   404 CellDev? Cy? Pu. replication protein                   Sim. to A.rhizogenes repC
y4cJ       Y4CJ_SINFN  (P55392)   326 CellDev? Cy? Pu. replication protein                   Sim. to A.rhizogenes repB
y4cK       Y4CK_SINFN  (P55393)   407 CellDev? Cy? Pu. replication protein                   Sim. to A.rhizogenes repA
y4cL traI  TRAI_SINFN  (P55394)   208 Enz:?    Cy  Pr. autoinducer synthetase
y4cM trbB  TRBB_SINFN  (P55395)   325 Export   Cy  Pr. conjugal transfer protein pulE fam.
y4cN trbC  TRBC_SINFN  (P55396)   127 Export   Tm  Pr. conjugal transfer protein
y4cO trbD  TRBD_SINFN  (P55397)    99 Export   Tm  Pr. conjugal transfer protein
y4cP trbEA TRBE1_SINFN (P55398)   149 Export   Cy? Pr. conjugal transfer protein
y4cQ trbEB TRBE2_SINFN (P55399)   662 Export   Cy? Pr. conjugal transfer protein
y4dA trbJ  TRBJ_SINFN  (P55400)   267 Export   Cy? Pr. conjugal transfer protein
y4dB trbK  TRBK_SINFN  (P55401)    65 Export   Pe? Pr. conjugal transfer protein
y4dC trbL  TRBL_SINFN  (P55402)   391 Export   Tm  Pr. conjugal transfer protein
y4dD trbF  TRBF_SINFN  (P55403)   220 Export   Tm? Pr. conjugal transfer protein
y4dE trbG  TRBG_SINFN  (P55404)   270 Export   Pe? Pr. conjugal transfer protein
y4dF trbH  TRBH_SINFN  (P55405)   148 Export   Lp? Pr. conjugal transfer protein
y4dG trbI  TRBI_SINFN  (P55406)   431 Export   Tm? Pr. conjugal transfer protein
y4dH traR  TRAR_SINFN  (P55407)   236 TraReg   Cy  luxR family H-T-H; Pr. regulates conjugal
                                                   transfer in presence of autoinducer
y4dI traM  TRAM_SINFN  (P55408)   107 TraReg   Cy? Pu. repressor
y4dJ       Y4DJ_SINFN  (P55409)    77 TraReg?  Cy? Pu. DNA-binding; cro/C1-type H-T-H
y4dL       Y4DL_SINFN  (P55411)   196 TraReg?  Cy? Pu. DNA-binding; cro/C1-type H-T-H
y4dM       Y4DM_SINFN  (P55412)   409 Unknown  Cy?                                           Sim. to E.coli hipA & H.influenzae HI0665;
                                                                                             Sim. to y4mE
y4dN       Y4DN_SINFN  (P55413)    62 Unknown  Cy?
y4dP       Y4DP_SINFN  (P55415)   200 Unknown  Cy?                                           Sim. to A.tumefaciens TI plasmid ORF2&3 in
                                                                                             conjugal transfer region 1
y4dQ traB  TRAB_SINFN  (P55416)   387 CellDev? Tm  Pr. conjugal transfer protein
y4dR traF  TRAF_SINFN  (P55417)   188 CellDev? Pe? Pr. conjugal transfer protein
y4dS traA  TRAA_SINFN  (P55418) 11102 CellDev? Cy? Pr. conjugal transfer protein
y4dT traC  TRAC_SINFN  (P55419)   102 CellDev? Cy? Pr. conjugal transfer protein
y4dU traD  TRAD_SINFN  (P55420)    71 CellDev? Cy? Pr. conjugal transfer protein
y4dV traG  TRAG_SINFN  (P55421)   640 CellDev? Tm  Pr. conjugal transfer protein
y4dW       Y4DW_SINFN  (P55422)   204 Unknown  Cy?
y4dX       Y4DX_SINFN  (P55423)   192 Unknown  Cy?
y4eA       Y4EA_SINFN  (P55424)    88 Unknown  Cy?
y4eB       Y4EB_SINFN  (P55425)   104 Unknown  Cy?
y4eC       Y4EC_SINFN  (P55426)   307 Unknown  Cy?                                           Sim. to N-ter. of E.coli pRP4 & pR751 traC
y4eD       Y4ED_SINFN  (P55427)   375 Enz:3?   Cy? Pu. phosphodiesterase                     Sim. to glycerophosphoryl diester phosphodiesterases
y4eE       Y4EE_SINFN  (P55428)   358 Unknown  Cy?
y4eF       Y4EF_SINFN  (P55429)   251 Int-Rec  Cy? Pu. integrase/recombinase 'phage-type'
y4eH nolL  NOLL_SINFN  (P55431)   366 Transp?  Tm? Pu. transport protein                     NODULATION; nolL is said to be an
                                                                                             acetyltransferase but seems not probable
y4eI       Y4EI_SINFN  (P55432)   103 Unknown  Tm?
y4eK       Y4EK_SINFN  (P55434)   248 Enz:1    Cy? Pr. short chain oxidoreductase
y4eL       Y4EL_SINFN  (P55435)   248 Enz:1    Cy? Pr. short chain oxidoreductase
y4eN       Y4EN_SINFN  (P55437)   103 Unknown  Cy?
y4eO       Y4EO_SINFN  (P55438)   221 Unknown  Cy?
y4fA       Y4FA_SINFN  (P55439)   845 Chemot   Tm  Pr. chemoreceptor                         Sim. to y4sI
y4fB       Y4FB_SINFN  (P55440)   664 Unknown  Cy?
y4fD       Y4FD_SINFN  (P55442)   220 Unknown  Tm
y4fE       Y4FE_SINFN  (P55443)   160 Unknown  Pe?
y4fF       Y4FF_SINFN  (P55444)   181 Unknown  Cy?
y4fG       Y4FG_SINFN  (P55445)   129 Unknown  Cy?
y4fH       Y4FH_SINFN  (P55446)   102 Unknown  Cy?
y4fJ       Y4FJ_SINFN  (P55448)   343 Transp?  Om  Pu. porin                                 Sim. to R.leguminosarum OMPIIIA
y4fK       Y4FK_SINFN  (P55449)   427 TraReg?  Cy? araC family H-T-H regulator
y4fL       Y4FL_SINFN  (P55450)   275 Enz:?    Tm? Belongs to inositol monophosphatase fam.
y4fM       Y4FM_SINFN  (P55451)   311 Unknown  Cy?
y4fN       Y4FN_SINFN  (P55452)   569 Transp   Tm  Pr. ABC transporter permease
y4fO       Y4FO_SINFN  (P55453)   339 Transp   Cy  Pr. ABC transporter ATP-binding protein
y4fP       Y4FP_SINFN  (P55454)   358 Transp   Pe  Pr. ABC transporter binding protein
y4fQ       Y4FQ_SINFN  (P55455)   392 Enz:2?   Cy? 'ROK' family member
                                      TraReg?
y4fR       Y4FR_SINFN  (P55456)   546 Unknown  Cy?                                           Sim. to S.flexneri ipaH 7.8 & Y.pestis yopM
y4gA       Y4GA_SINFN  (P55457)   187 Unknown  Cy?
y4gB       Y4GB_SINFN  (P55458)   139 Unknown  Cy?
y4gC       Y4GC_SINFN  (P55459)   192 Int-Rec  Cy? Pu. integrase/recombinase 'phage-type'
y4gE       Y4GE_SINFN  (P55461)   248 Unknown  Cy?                                           Could be bogus
y4gF       RFBB_SINFN  (P55462)   350 Enz:4    Cy? Pr. dTDP-glucose 4,6-dehydratase          rfbB homolog
y4gG       RMLD_SINFN  (P55463)   296 Enz:1    Cy? Pr. dTDP-4-dehydrorhamnose reductase      rfbD homolog
y4gH rmlA  RMLA_SINFN  (P55464)   286 Enz:1    Cy? Pr. glucose-1-phosphate thymidylyltransf. rfbA homolog
y4gI       Y4GI_SINFN  (P55465)   909 Enz:?    Cy? Pu. enzyme involved in polysaccharide     Sim. to M.xanthus O-antigen rfbC
                                                   biosynthesis
y4gJ       Y4GJ_SINFN  (P55466)   192 Unknown  Cy?
y4gK fixF  FIXF_SINFN  (P55467)   402 Enz:?    Cy? Pu. enzyme involved in polysaccharide     NITROGEN FIXATION; Low sim. to E.coli kpsS
                                                   biosynthesis
y4gL       RMLC_SINFN  (P55468)   195 Enz:5    Cy? Pr. dTDP-4-dehydrorhamnose 3,5-epimerase  rfbC homolog
y4gM       Y4GM_SINFN  (P55469)   586 Transp   Tm  Pr. ABC transporter ATP-binding protein
y4gN       Y4GN_SINFN  (P55470)   383 Enz:?    Cy?                                           Sim. to V.anguillarum virA
y4hA       Y4HA_SINFN  (P55471)   367 Transp?  Tm  Pu. ionic transporter                     Sim. to E.coli chaA
y4hB noeE  NOEE_SINFN  (P55472)   419 Enz:2    Cy? Transfer activated sulfate to fucose      NODULATION
y4hC noeI  NOEI_SINFN  (P55473)   243 Enz:?    Cy? Not yet characterized step in nod-factor  NODULATION
                                                   synthesis
y4hD nolO  NOLO_SINFN  (P55474)   680 Enz:2    Cy? O-carbamoylation of nod-factor            NODULATION; Sim. to y4nB (nodU)
y4hE nodJ  NODJ_SINFN  (P55475)   262 Transp   Tm  Pr. ABC transporter permease              NODULATION
y4hF nodI  NODI_SINFN  (P55476)   343 Transp   Cy  Pr. ABC transporter ATP-binding protein   NODULATION
y4hG nodC  NODC_SINFN  (P50357)   413 Enz:2    Cy  N-acetylglucosaminyltransferae            NODULATION
y4hH nodB  NODB_SINFN  (P50355)   215 Enz:3    Cy  Chitooligosaccharide deacetylase          NODULATION
y4hI nodA  NODA_SINFN  (P50349)   196 Enz:2    Cy  N-acyltransferase                         NODULATION
y4hJ       Y4HJ_SINFN  (P55477)   260 Enz:1?   Cy? Pu. oxidoreductase                        Sim. to N-ter. of anaerobic coproporphyrinogen III oxidases
y4hK       Y4HK_SINFN  (P55478)   247 Unknown  Tm
y4hL       Y4HL_SINFN  (P55479)    85 Unknown  Cy?
y4hM       Y4HM_SINFN  (P55480)   403 Enz:1?   Pe? Pu. oxidoreductase                        Low sim. to Z.mobilis glucose-fructose oxidoreductase
y4hN       Y4HN_SINFN  (P55481)   144 Int-Rec? Cy?                                           Sim. to IS elements IS2/IS1312/IS866
                                                                                             proteins; Sim. to y4jB & y4rG
y4hO       Y4HO_SINFN  (P50359)   115 Unknown  Cy?                                           Sim. to y4jC; Sim. to ORFC from R.leguminosarum
                                                                                             symbiotic plasmid
y4hP       Y4HP_SINFN  (P50360)   552 Unknown  Cy?                                           Sim. to y4aQ, y4jD & y4qI;
                                                                                             Sim. to Orfs in R.meliloti & A.tumefaciens TI plasmid
y4hQ       Y4HQ_SINFN  (P50361)   194 Unknown  Cy?                                           Sim. to Orf-3 in A.rhizogenes plasmid pRIA4B
y4hR       Y4HR_SINFN  (P55482)    74 Unknown  Cy?
y4iR       Y4IR_SINFN  (P55485)   161 Enz:?    Cy? Could be involved in polysaccharide       Sim. to R.leguminosarum psiB
                                                   biosynthesis
y4iC       Y4IC_SINFN  (P55486)   230 Unknown  Cy?                                           Sim. to M.tuberculosis Mtcy373.06;
                                                                                             D.vulgaris rrf2 & E.coli yjeB
y4iD       Y4ID_SINFN  (P55487)   662 Enz:1    Cy? Pr. monooxygenase
y4iF       Y4IF_SINFN  (P55489)   305 Unknown  Cy?
y4iH       Y4IH_SINFN  (P55491)   239 Unknown  Pe?                                           Sim. to y4jT
y4iI       Y4II_SINFN  (P55492)   703 Unknown  Tm
y4iJ       Y4IJ_SINFN  (P55493)   596 Unknown  Tm?
y4iK       Y4IK_SINFN  (P55494)   232 Unknown  Cy?
y4iL       Y4IL_SINFN  (P55495)   432 Unknown  Cy?
y4iM       Y4IM_SINFN  (P55496)   432 Unknown  Cy?
y4iN       Y4IN_SINFN  (P55497)   208 Unknown  Pe?
y4iQ       Y4IQ_SINFN  (P55500)   298 Int-Rec  Cy? Pu. Tpase-associated ATP-binding protein  Id. to y4nD & y4sD; Sim. to y4bM, y4kI, y4tA, y4pL & y4uH
                                                                                             Sim. to ATP-binding protein from IS21/IS1162 fam.
y4jA       Y4JA_SINFN  (P55501)   504 Int-Rec? Cy? Pu. transposase                           Low sim. to Tpase IS21/IS408/IS1162 family
                                                                                             Id. to y4nE & y4sE
y4jB       Y4JB_SINFN  (P55502)   152 Int-Rec? Cy?                                           Sim. to IS elements IS2/IS1312/IS866
                                                                                             proteins; Sim. to y4hN & y4rG
y4jC       Y4JC_SINFN  (P55503)   117 Unknown  Cy?                                           Sim. to y4hO; Sim. to ORFC from R.leguminosarum
                                                                                             symbiotic plasmid
y4jD       Y4JD_SINFN  (P55504)   511 Unknown  Cy?                                           Sim. to y4aQ, y4hP & y4qI;
                                                                                             Sim. to Orfs in R.meliloti & A.tumefaciens TI plasmid
y4jE       Y4JE_SINFN  (P55505)   273 Unknown  Tm?
y4jF       Y4JF_SINFN  (P55506)   519 Unknown  Tm
y4jG       Y4JG_SINFN  (P55507)   162 Unknown  Tm?
y4jH       Y4JH_SINFN  (P55508)   205 Unknown  Cy?
y4jI       Y4JI_SINFN  (P55509)   130 Unknown  Cy?
y4jJ       Y4JJ_SINFN  (P55510)    85 Celldev? Cy? Pu. plasmid stability                     Sim. to P.syringase stbC
y4jK       Y4JK_SINFN  (P55511)   140 Celldev? Cy? Pu. plasmid stability                     Sim. to P.syringase stbB
y4jL       Y4JL_SINFN  (P55512)   220 Unknown  Cy?
y4jN       Y4JN_SINFN  (P55514)   146 Unknown  Cy?
y4jO       Y4JO_SINFN  (P55515)   321 Unknown  Cy?
y4jQ       Y4JQ_SINFN  (P55517) 11039 Unknown  Cy?
y4jR       Y4JR_SINFN  (P55518)   151 Unknown  Cy?
y4jS       Y4JS_SINFN  (P55519)   413 Unknown  Cy?
y4jT       Y4JT_SINFN  (P55520)   336 Unknown  Pe?                                           Sim. to y4iH
y4kA       Y4KA_SINFN  (P55521)   322 Unknown  Cy?
y4kB       Y4KB_SINFN  (P55522)   141 Unknown  Tm?
y4kD       Y4KD_SINFN  (P55524)   549 Unknown  Cy?
y4kE       Y4KE_SINFN  (P55525)   347 Unknown  Cy?
y4kF       Y4KF_SINFN  (P55526)   434 Unknown  Cy?
y4kG       Y4KG_SINFN  (P55527)    69 Unknown  Tm?
y4kH       Y4KH_SINFN  (P55528)   127 Unknown  Cy?
y4kI       Y4BM_SINFN  (P55380)   263 Int-Rec  Cy? Pu. Tpase-associated ATP-binding protein  Id. to y4bM & y4tA; Sim. to y4iQ, y4nD, y4sD, y4pL & y4uH
                                                                                             Sim. to ATP-binding protein from IS21/IS1162 fam.
y4kJ       Y4BL_SINFN  (P55379)   516 Int-Rec  Cy? Pu. transposase                           Id. to y4bL & y4tB; Sim. to y4uI;
                                                                                             Sim. to Tpase IS21/IS1162 family
y4kK       Y4KK_SINFN  (P55529)   312 Unknown  Cy?
y4kL       Y4KL_SINFN  (P55530)   330 Unknown  Cy? Pr. AAA-family ATPase
y4kM       Y4KM_SINFN  (P55531)   117 Unknown  Cy?
y4kN       Y4KN_SINFN  (P55532)   140 Unknown  Cy?
y4kO       Y4KO_SINFN  (P55533)    82 Unknown  Cy?
y4kP       Y4KP_SINFN  (P55534)    96 Unknown  Cy?
y4kQ       Y4KQ_SINFN  (P55535)   142 Unknown  Cy?                                           Could be bogus
y4kR       Y4KR_SINFN  (P55536)    43 Unknown  Cy?                                           Sim. to N-ter. of E.herbicola ORF6 in crtE-crtX region;
                                                                                             Could be bogus; Smallest ORF predicted to be a protein
y4kS       Y4KS_SINFN  (P55537)   301 Unknown  Cy?                                           High sim. to B.japonicum hyp. protein
y4kT       Y4KT_SINFN  (P55538)   516 Unknown  Cy?                                           High sim. to B.japonicum hyp. protein
y4kU       ISPA_SINFN  (P55539)   332 Enz:2    Cy? Pr. geranyltranstransferase
y4kV       CPXU_SINFN  (P55540)   447 Enz:1    Cy? Pr. cytochrome P450
y4lA       Y4LA_SINFN  (P55541)   278 Enz:1    Cy? Pr. short chain oxidoreductase
y4lB       FE45_SINFN  (P55542)   102 E-trans  Cy? Pu. 3Fe-3S ferredoxin of P450 system
y4lC       CPXR_SINFN  (P55543)   467 Enz:1    Cy? Pr. cytochrome P450
y4lD       CPXP_SINFN  (P55544)   400 Enz:1    Cy? Pr. cytochrome P450
y4lF       Y4LF_SINFN  (P55546)   323 Unknown  Cy?
y4lG       Y4LG_SINFN  (P55547)   161 Unknown  Cy?
y4lH       Y4LH_SINFN  (P55548)   192 Celldev? Cy? Pu. cell filamentation                    Sim. to enterobacterial protein fic
y4lI       Y4LI_SINFN  (P55549)    69 Unknown  Cy?
y4lJ       Y4LJ_SINFN  (P55550)   167 Unknown  Cy?
y4lK       Y4LK_SINFN  (P55551)   132 Unknown  Cy?
y4lL       Y4LL_SINFN  (P55552)   827 Unknown  Cy?                                           Belongs to E.coli yegE/yhdA/yhjK/yjcC family
y4lN       Y4LN_SINFN  (P55554)   160 Unknown  Tm?
y4lO       Y4LO_SINFN  (P55555)   260 Unknown  Cy?                                           Sim. to X.campestris avirulence avrrXV
y4lR       Y4LR_SINFN  (P55558)   522 Unknown  Cy?
y4lS       Y4LS_SINFN  (P55559)   183 Int-Rec  Cy? Pu. integrase/recombinase 'resolvase-type'
y4mA       Y4MA_SINFN  (P55560)   141 Unknown  Cy?
y4mB       Y4MB_SINFN  (P55561)   229 Unknown  Om?                                           Sim. to E.coli yciD, V.cholerae ompW, P.oleovorans alkL
y4mC       Y4MC_SINFN  (P55562)   237 Unknown  Pe?
y4mD       Y4MD_SINFN  (P55563)    89 Unknown  Cy?
y4mE       Y4ME_SINFN  (P55564)   420 Unknown  Cy?                                           Sim. to E.coli hipA & H.influenzae HI0665
y4mF       Y4MF_SINFN  (P55565)    76 TraReg?  Cy? Pu. DNA-binding; cro/C1-type H-T-H
y4mG       Y4MG_SINFN  (P55566)    73 Unknown  Cy?
y4mH       Y4MH_SINFN  (P55567)   297 Unknown  Cy?
y4mI       Y4MI_SINFN  (P55568)   324 Transp   Pe  Pr. ABC transporter binding protein       Pu. sugar transport operon
y4mJ       Y4MJ_SINFN  (P55569)   333 Transp   Tm  Pr. ABC transporter permease              Pu. sugar transport operon
y4mK       Y4MK_SINFN  (P55570)   497 Transp   Cy  Pr. ABC transporter ATP-binding protein   Pu. sugar transport operon
y4mL       Y4ML_SINFN  (P55571)   419 Transp?  Tm  Pu. permease                              Belongs to E.coli yiaN/ygiK family
y4mM       Y4MM_SINFN  (P55572)   541 Transp?  Tm  Pu. permease                              Belongs to SBR family 7
y4mN       Y4MN_SINFN  (P55573)   345 Enz:2?   Cy? Pr. TPP enzyme C-terminal                 Belongs to transketolase family; Pu. frameshift
y4mO       Y4MO_SINFN  (P55574)   279 Enz:2?   Cy? Pr. TPP enzyme N-terminal                 Belongs to transketolase family; Pu. frameshift
y4mP       Y4MP_SINFN  (P55575)   253 Enz:1    Cy? Pr. short chain oxidoreductase
y4mQ       Y4MQ_SINFN  (P55576)   298 TraReg?  Cy? LysR family H-T-H regulator
y4nA       Y4NA_SINFN  (P55577)   726 Enz:3?   Cy? Pr. peptidase (S9A family)                Sim. to y4qF & y4sO
y4nB nodU  NODU_SINFN  (P31957)   558 Enz:2    Cy  6-O-carbamoylation of nod-factor          NODULATION; Sim. to y4hD (nolO)
y4nC nodS  NODS_SINFN  (P19441)   216 Enz:2    Cy  Methyltransferase involved in nod-factor  NODULATION
                                                   biosynthesis
y4nD       Y4IQ_SINFN  (P55500)   298 Int-Rec  Cy? Pu. Tpase-associated ATP-binding protein  Id. to y4iQ & y4sD; Sim. to y4bM, y4kI, y4tA, y4pL & y4uH
                                                                                             Sim. to ATP-binding protein from IS21/IS1162 fam.
y4nE       Y4JA_SINFN  (P55501)   504 Int-Rec? Cy? Pu. transposase                           Low sim. to Tpase IS21/IS408/IS1162 family
                                                                                             Id. to y4JA & y4sE
y4nF       Y4NF_SINFN  (P55578)   230 Unknown  Pe?                                           Low sim. to y4aO
y4nG       Y4NG_SINFN  (P55579)   396 Enz:?    Cy? Pu. NAD-dependent nucleotide
                                                   sugar epimerase/dehydrogenase
y4nH       Y4NH_SINFN  (P55580)   117 Unknown  Tm                                            Sim. to E.coli ethidium bromide resistance (ebr)
y4nI       Y4NI_SINFN  (P55581)   120 Unknown  Tm?
y4nJ       Y4NJ_SINFN  (P55582)   505 Enz:1    Cy? Pr. GMC-type oxidoreductase
y4nK       Y4NK_SINFN  (P55583)   662 Unknown  Tm?
y4nL       Y4NL_SINFN  (P55584)   356 Enz:?    Cy? Pu. NAD-dependent nucleotide sugar
                                                   epimerase/dehydrogenase
y4nM       Y4NM_SINFN  (P55585)   516 Transp?  Tm  Pu. permease                              Sim. to A.caulidans noeC
y4oA       Y4OA_SINFN  (P55586)   593 Enz:?    Cy?                                           Sim. to E.coli pMCCC7 microcin biosynthesis
                                                                                             protein mccB; Sim. to y4qC
y4oB       Y4OB_SINFN  (P55587)   129 Unknown  Cy?
y4oC       Y4OC_SINFN  (P55588)   230 Unknown  Cy?
y4oD       Y4OD_SINFN  (P55589)   214 Unknown  Cy?
y4oE       Y4OE_SINFN  (P55590)    69 Unknown  Cy?
y4oL       Y4OL_SINFN  (P55597)    88 Unknown  Cy?                                           High sim. to y4bB & y4pI
y4oM       Y4OM_SINFN  (P55598)   149 Unknown  Cy?                                           High sim. to y4bC & y4pJ
y4oN       Y4ON_SINFN  (P55599)    70 Unknown  Cy?                                           High sim. to y4bD & y4pK
y4oP       Y4OP_SINFN  (P55601)   431 Transp   Pe  Pr. ABC transporter binding protein       Pu. sugar-like transport operon
y4oQ       Y4OQ_SINFN  (P55602)   309 Transp   Tm  Pr. ABC transporter permease              Pu. sugar-like transport operon
y4oR       Y4OR_SINFN  (P55603)   277 Transp   Tm  Pr. ABC transporter permease              Pu. sugar-like transport operon
y4oS       Y4OS_SINFN  (P55604)   371 Transp   Cy  Pr. ABC transporter ATP-binding protein   Pu. sugar-like transport operon
y4oT       Y4OT_SINFN  (P55605)   196 Unknown  Cy?                                           Sim. to y4oV & y4pA
y4oU       Y4OU_SINFN  (P55606)   402 Unknown  Cy?                                           Belongs to UPF0261 family
y4oV       Y4OV_SINFN  (P55607)   285 Unknown  Cy?                                           Sim. to y4oT & y4pA
y4oW       Y4OW_SINFN  (P55608)   216 Unknown  Cy?
y4oX       Y4OX_SINFN  (P55609)   360 Enz:1    Cy? Pr. NAD-dependent oxidoreductase          Sim. to R.meliloti mocA & S.griseus strI
y4pA       Y4PA_SINFN  (P55610)   609 TraReg   Cy? Pr. sigma54-dependent H-T-H               In N-ter., sim. to y4oT & y4oV
y4pB otsB  OTSB_SINFN  (P55611)   265 Enz:3    Cy  Pr. trehalose-phosphatase                 High sim. to E.coli
y4pC otsA  OTSA_SINFN  (P55612)   464 Enz:2    Cy  Pr. a,a-trehalose-phosphate synthase      High sim. to E.coli; 2nd copy exists in
                                                                                             pNGR234a (fq1-fq2) truncated by an IS
y4pD       Y4PD_SINFN  (P55613)   171 TraReg?  Cy? ros/mucR homolog                          Lack Zn finger char. of this family;
                                                                                             High sim. to y4aP
y4pE       Y4PE_SINFN  (P55614)   135 Int-Rec? Cy?                                           Sim. to R.fredii RFRS9 & A.xylinum IS1268 Orf;
                                                                                             Id. to y4sA
y4pF       Y4PF_SINFN  (P55615)   387 Int-Rec  Cy? Pr. transposase                           Sim. to Tpase IS1111A/IS1328/IS1533 family;
                                                                                             Id. to y4sB; Sim. to y4qE
y4pG       Y4PG_SINFN  (P55616)   192 Int-Rec? Cy?                                           Id. to y4sC; Sim. to A.xylinum IS1268 orfA
y4pH       Y4BA_SINFN  (P55368)   694 Unknown  Tm?                                           Id. to y4bA
y4pI       Y4BB_SINFN  (P55369)    88 Unknown  Pe?                                           Id. to y4bB; High sim. to y4oL
y4pJ       Y4BC_SINFN  (P55370)   149 Unknown  Cy?                                           Id. to y4bC; High sim. to y4oM
y4pK       Y4BD_SINFN  (P55371)    89 Unknown  Cy?                                           Id. to y4bD; High sim. to y4oN
y4pL       Y4PL_SINFN  (P55617)   245 Int-Rec  Cy? Pu. Tpase-associated ATP-binding protein  Sim. tp y4bM, y4kI, y4tA, y4iQ, y4nD, y4sD & y4uH;
                                                                                             Sim. to ATP-binding protein from IS21/IS1162 fam.
y4pM       Y4PM_SINFN  (P55618)   272 Unknown  Cy?
y4pN syrM1 SYRM1_SINFN (P55619)   338 TraReg   Cy  lysR family H-T-H regulator               High sim. to syrM2
y4pO       Y4PO_SINFN  (P55620)   400 Int-Rec  Cy? Pr. transposase                           Belongs to Tpase Mutator family
y4qB       Y4QB_SINFN  (P55623)   164 Unknown  Cy?
y4qC       Y4QC_SINFN  (P55624)   583 Enz:?    Cy?                                           Sim. to E.coli pMCCC7 microcin biosynthesis
                                                                                             protein mccB; Sim. to y4oA
y4qD       Y4QD_SINFN  (P55625)   244 Unknown  Cy?                                           Sim. to y4rO
y4qE       Y4QE_SINFN  (P55626)   390 Int-Rec  Cy? Pr. transposase                           Sim. to Tpase IS1111A/IS1328/IS1533 family;
                                                                                             Sim. to y4pF & y4sB
y4qF       Y4QF_SINFN  (P55627)   754 Enz:3?   Cy? Pr. peptidase (S9A family)                Sim. to y4nA & y4sO
y4qG       Y4QG_SINFN  (P55628)   448 Enz:2    Cy? Class-3 aminotransferase
y4qH       Y4QH_SINFN  (P55629)   326 TraReg?  Cy? luxR family H-T-H regulator
y4qI       Y4QI_SINFN  (P55630)   539 Unknown  Cy?                                           Sim. to y4aQ, y4hP & y4jD;
                                                                                             Sim. to Orfs in R.meliloti & A.tumefsciens TI plasmid
y4qJ       Y4QJ_SINFN  (P55631)   398 Int-Rec  Cy? Pu. transposase                           Sim. to Tpase IS801
y4qK       Y4QK_SINFN  (P55632)   308 Int-Rec  Cy? Pu. integrase/recombinase 'phage-type'
y4rA       Y4RA_SINFN  (P55634)   409 Int-Rec  Cy? Pu. integrase/recombinase 'phage-type'
y4rB       Y4RB_SINFN  (P55635)   314 Int-Rec  Cy? Pu. integrase/recombinase 'phage-type'
y4rC       Y4RC_SINFN  (P55636)   332 Int-Rec  Cy? Pu. integrase/recombinase 'phage-type'
y4rD       Y4RD_SINFN  (P55637)   281 Int-Rec  Cy? Pu. integrase/recombinase 'phage-type'
y4rE       Y4RE_SINFN  (P55638)   310 Int-Rec  Cy? Pu. integrase/recombinase 'phage-type'
y4rF       Y4RF_SINFN  (P55639)   425 Int-Rec  Cy? Pu. integrase/recombinase 'phage-type'
y4rG       Y4RG_SINFN  (P55640)   135 Int-Rec? Cy?                                           Sim. to IS elements IS2/IS1312/IS866
                                                                                             proteins; Sim. to y4hN & y4jB
y4rH       Y4RH_SINFN  (P55641)   478 Enz:6?   Cy? Pu. ligase                                Sim. to biotin carboxylase
y4rJ       Y4RJ_SINFN  (P55643)   396 Int-Rec  Cy? Pu. transposase                           Sim. to Tpase IS1111A/IS1328/IS1533 family
y4rL       Y4RL_SINFN  (P55645)   155 Unknown  Cy?                                           Some sim. to y4iE & y4zA; Could be bogus
y4rM       Y4RM_SINFN  (P55646)   350 Unknown  Cy?                                           Sim. to y4zA
y4rN       Y4RN_SINFN  (P55647)   405 Unknown  Tm                                            Sim. to M.tuberculosis Mtcy50.24
y4rO       Y4RO_SINFN  (P55648)   618 Enz:?    Cy?                                           Sim. to y4qD; Sim. to C-ter. of histidinol-
                                                                                             phosphate aminotransferase
y4sA       Y4PE_SINFN  (P55614)   135 Int-Rec? Cy?                                           Sim. to R.fredii RFRS9 & A.xylinum IS1268 Orf;
                                                                                             Id. to y4pE
y4sB       Y4PF_SINFN  (P55615)   387 Int-Rec  Cy? Pr. transposase                           Sim. to Tpase IS1111A/IS1328/IS1533 family;
                                                                                             Id. to y4pF; Sim. to y4qE
y4sC       Y4PG_SINFN  (P55616)   192 Int-Rec? Cy?                                           Id. to y4pG; Sim. to A.xylinum IS1268 orfA
y4sD       Y4IQ_SINFN  (P55500)   298 Int-Rec  Cy? Pu. Tpase-associated ATP-binding protein  Id. to y4iQ & y4nD; Sim. to y4bM, y4kI, y4tA, y4pL & y4uH
                                                                                             Sim. to ATP-binding protein from IS21/IS1162 fam.
y4sE       Y4JA_SINFN  (P55501)   504 Int-Rec? Cy? Pu. transposase                           Low sim. to Tpase IS21/IS408/IS1162 family
                                                                                             Id. to y4JA & y4nE
y4sG       Y4SG_SINFN  (P55650)   336 Enz:6?   Cy? Pu. ligase                                Sim. to D-ala,D-ala ligases
y4sH       Y4SH_SINFN  (P55651)   461 Enz:?    Cy? Pu. cell wall comp. biosynthesis          Sim. to B.anthracis capA; High sim. to y4uA
y4sI       Y4SI_SINFN  (P55652)   756 Chemot   Tm  Pr. chemoreceptor                         Sim. to y4fA
y4sJ gabD  GABD_SINFN  (P55653)   491 Enz:1    Cy? Pr. succinate-semialdehyde dehydrogenase
y4sK       Y4SK_SINFN  (P55654)   126 Unknown  Cy? Pr. important cellular function           Belongs to YER057C/YIL051C/yjgF family
y4sL       Y4SL_SINFN  (P55655)   203 Enz:1?   Cy? Pu. oxidoreductase                        Sim. to C-ter. of E.coli D-amino acid
                                                                                             dehydrogenase small subunit
y4sM       Y4SM_SINFN  (P50337)   127 TraReg?  Cy? asnC/lrp family H-T-H regulator           Lacks H-T-H region; Could be bogus
y4sN       Y4SN_SINFN  (P50358)   125 Int-Rec  Cy? Pu. transposase                           Sim. to Tpase IS6501 family
y4sO       Y4SO_SINFN  (P55656)   705 Enz:3?   Cy? Pr. peptidase (S9A family)                Sim. to y4nA & y4qF
y4tA       Y4BM_SINFN  (P55380)   263 Int-Rec  Cy? Pu. Tpase-associated ATP-binding protein  Id. to y4bM & y4kI; Sim. to y4iQ, y4nD, y4sD, y4pL & y4uH
                                                                                             Sim. to ATP-binding protein from IS21/IS1162 fam.
y4tB       Y4BL_SINFN  (P55379)   516 Int-Rec  Cy? Pu. transposase                           Id. to y4bL & y4kJ; Sim. to y4uI;
                                                                                             Sim. to Tpase IS21/IS1162 family
y4tD       Y4TD_SINFN  (P55658)   169 TraReg?  Cy? asnC/lrp family H-T-H regulator
y4tE       Y4TE_SINFN  (P55659)   300 Transp   Pe  Pr. ABC transporter binding protein       Pu. amino acid transport operon
y4tF       Y4TF_SINFN  (P55660)   238 Transp   Tm  Pr. ABC transporter permease              Pu. amino acid transport operon
y4tG       Y4TG_SINFN  (P55661)   231 Transp   Tm  Pr. ABC transporter permease              Pu. amino acid transport operon
y4tH       Y4TH_SINFN  (P55662)   257 Transp   Cy  Pr. ABC transporter ATP-binding protein   Pu. amino acid transport operon
y4tI       Y4TI_SINFN  (P55663)   402 Enz:3?   Cy? Pu. peptidase (M40 family)
y4tJ       Y4TJ_SINFN  (P55664)   332 Enz:4    Cy  Pu. threonine dehydratase
y4tK       Y4TK_SINFN  (P55665)   331 Enz:4    Cy? Pu. cyclodeaminase
y4tL       Y4TL_SINFN  (P55666)   390 Enz:3?   Cy? Pu. peptidase/hydrolase (M24 family)      Sim. to y4tM
y4tM       Y4TM_SINFN  (P55667)   392 Enz:3?   Cy? Pu. peptidase/hydrolase (M24 family)      Sim. to y4tL
y4tN       Y4TN_SINFN  (P55668)   174 Unknown  Cy?
y4tO       Y4TO_SINFN  (P55669)   531 Transp   Pe  Pr. ABC transporter binding protein       Pu. peptide transport operon
y4tP       Y4TP_SINFN  (Q53191)   313 Transp   Tm  Pr. ABC transporter permease              Pu. peptide transport operon
y4tQ       Y4TQ_SINFN  (Q53192)   291 Transp   Tm  Pr. ABC transporter permease              Pu. peptide transport operon
y4tR       Y4TR_SINFN  (Q53193)   335 Transp   Cy  Pr. ABC transporter ATP-binding protein   Pu. peptide transport operon
y4tS       Y4TS_SINFN  (Q53194)   353 Transp   Cy  Pr. ABC transporter ATP-binding protein   Pu. peptide transport operon
y4uA       Y4UA_SINFN  (Q53195)   461 Enz:?    Cy? Pu. cell wall comp. biosynthesis          Sim. to B.anthracis capA; High sim. to y4sH
y4uB       Y4UB_SINFN  (Q53196)   467 Enz:2    Cy? Class-3 aminotransferase                  Could be a 4-aminobutyrate aminotransferase
y4uC       Y4UC_SINFN  (Q53197)   512 Enz:1    Cy? Pr. aldehyde dehydrogenase                Could be a succinate-semialdehyde dehydrogenase
y4uD       Y4UD_SINFN  (P55670)   165 Unknown  Cy?                                           Belongs to UPF0262 family
y4uE       Y4UE_SINFN  (Q53198)   359 Int-Rec  Cy? Pu. transposase                           Sim. to Tpase IS110 family
y4uF       DHE3_SINFN  (Q53199)   443 Enz:1    Cy  Pr. glutamate dehydrogenase
y4uG       Y4UG_SINFN  (P55671)    71 Unknown  Tm?
y4uH       Y4UH_SINFN  (Q53200)   248 Int-Rec  Cy? Pu. Tpase-associated ATP-binding protein  Sim. tp y4bM, y4kI, y4tA, y4iQ, y4nD, y4sD & y4pL;
                                                                                             Sim. to ATP-binding protein from IS21/IS1162 fam.
y4uI       Y4UI_SINFN  (Q53201)   514 Int-Rec  Cy? Pu. transposase                           Sim. to y4bL, y4kJ & y4tB;
                                                                                             Sim. to Tpase IS21/IS1162 family
y4uJ fixU  FIXU_SINFN  (Q53202)    76 Unknown  Cy?                                           NITROGEN FIXATION
y4uK nifZ  NIFZ_SINFN  (Q53203)   108 Unknown  Cy?                                           NITROGEN FIXATION
y4uL fdxN  FDXN_SINFN  (Q53204)    64 E-trans  Cy  4Fe-4S ferredoxin                         NITROGEN FIXATION
y4uM nifB  NIFB_SINFN  (Q53205)   493 Enz:?    Cy? Nitrogenase cofactors biosynthesis        NITROGEN FIXATION
y4uN nifA  NIFA_SINFN  (Q53206)   594 TraReg   Cy  Sigma54-dependent H-T-H regulator         NITROGEN FIXATION
y4uO fixX  FIXX_SINFN  (Q53207)    97 E-trans  Cy  Pr. 3Fe-3S ferredoxin                     NITROGEN FIXATION
y4uP fixC  FIXC_SINFN  (Q53208)   435 Enz:?    Cy? Nitrogenase cofactors biosynthesis        NITROGEN FIXATION
y4vA fixB  FIXB_SINFN  (Q53209)   369 E-trans  Cy  Electron transfer fixAB complex           NITROGEN FIXATION
y4vB fixA  FIXA_SINFN  (Q53210)   285 E-trans  Cy  Electron transfer fixAB complex           NITROGEN FIXATION
y4vC       Y4VC_SINFN  (Q53211)   106 Enz:?    Cy?                                           Belongs to hesB/yadR/yfhF family
y4vD       PRX5_SINFN  (Q53212)   188 Enz:1?   Cy? Pu. redox enzyme                          Sim. to C.boidinii peroxisomal proteins A/B
                                                                                             & H.influenzae HI0572
y4vE nifQ  NIFQ_SINFN  (Q53213)   230 Enz:?    Cy? Pu. nitrogenase Mo cofactor processing    NITROGEN FIXATION
y4vF dctA1 DCTA_SINFN  (P31601)   497 Transp   Tm  C4-dicarboxylate transport
y4vG       Y4VG_SINFN  (Q53215)   414 Enz:1    Cy? Pr. cytochrome P450 127A1
y4vH       Y4VH_SINFN  (Q53216)   218 Unknown  Cy?
y4vI       Y4VI_SINFN  (Q53217)   548 Enz:1    Cy? Pr. short chain oxidoreductase            Contains 2 homologous domains
y4vJ       Y4VJ_SINFN  (Q53218)   351 Enz:1?   Cy? Pu. monooxygenase                         Sim. to luxA/B (bacterial luciferase);
                                                                                             Sim. to y4wF
y4vK nifH1 NIFH_SINFN  (P19068)   296 Enz:1    Cy  Nitrogenase Fe protein                    NITROGEN FIXATION; Id. to y4xA (nifH2)
y4vL nifD1 NIFD_SINFN  (P19066)   504 Enz:1    Cy  Nitrogenase Mo-Fe protein alpha           NITROGEN FIXATION; Id. to y4xB (nifD2)
y4vM nifK1 NIFK_SINFN  (P19067)   513 Enz:1    Cy  Nitrogenase Mo-Fe protein beta            NITROGEN FIXATION; Id. to y4xC (nifK2)
y4vN nifE  NIFE_SINFN  (P55673)   496 Enz      Cy  Nitrogenase Fe-Mo cofactor biosynthesis   NITROGEN FIXATION
y4vO nifN  NIFN_SINFN  (P55674)   469 Enz      Cy  Nitrogenase Fe-Mo cofactor biosynthesis   NITROGEN FIXATION
y4vP nifX  NIFX_SINFN  (P55675)   160 Unknown  Cy?                                           NITROGEN FIXATION
y4vQ       Y4VQ_SINFN  (P55676)   162 Unknown  Cy?                                           NITROGEN FIXATION ?; Sim. to nifX-nifW intergenic
                                                                                             Orf in N-fixing bacteria; Sim. to y4xD
y4vR       Y4VR_SINFN  (P55677)   139 Enz:?    Cy? Nitrogenase Fe protein homolog            NITROGEN FIXATION ?; Sim. to N-ter. of nifH;
                                                                                             Could be bogus
y4vS fdxB  FER3_SINFN  (P55678)   105 E-trans  Cy  4Fe-4S ferredoxin                         NITROGEN FIXATION ?
y4wA       Y4WA_SINFN  (P55679)   512 Enz:3?   Cy? Pr. zinc peptidase (M16 family)           Sim. to y4wB
y4wB       Y4WB_SINFN  (P55680)   447 Enz:3?   Cy? Pu. zinc peptidase (M16 family)           Sim. to y4wA; Could lack enz. activity
                                                                                             as it lack Zn-binding site
y4wC       Y4WC_SINFN  (P55681)   143 TraReg   Cy? Pu. DNA-binding; cro/C1-type H-T-H
y4wD       Y4WD_SINFN  (P55682)   377 Transp?  Tm  Permease-type protein                     Sim. to R.meliloti mosC
y4wE hisC  HIS8_SINFN  (P55683)   368 Enz:2    Cy? Histidinol-phosphate aminotransferase
y4wF       Y4WF_SINFN  (P55684)   342 Enz:1?   Cy? Pu. monooxygenase                         Sim. to luxA/B (bacterial luciferase);
                                                                                             Sim. to y4vJ
y4wG       Y4WG_SINFN  (P55685)   181 Unknown  Cy?
y4wH       Y4WH_SINFN  (P55686)   145 Unknown  Cy?                                           Sim. to A.tumefaciens plasmid pTIA6 Orf in
                                                                                             pinF2 region
y4wI       Y4WI_SINFN  (P55687)   513 Unknown  Cy?
y4wJ       Y4WJ_SINFN  (P55688)   125 Unknown  Cy?
y4wK nifW  NIFW_SINFN  (P55689)   150 Unknown  Cy?                                           NITROGEN FIXATION
y4wL nifS  NIFS_SINFN  (P55690)   387 Enz:2    Cy? Cysteine desulfurase
y4wM       Y4WM_SINFN  (P55691)   663 Transp?  Pe  Pu. ABC transporter binding protein
y4wO       Y4WO_SINFN  (P55693)   106 Unknown  Cy?
y4wP       Y4WP_SINFN  (P55694)   135 Unknown  Cy?
y4xA nifH2 NIFH_SINFN  (P19068)   296 Enz:1    Cy  Nitrogenase Fe protein                    NITROGEN FIXATION; Id. to y4vK (nifH1)
y4xB nifD2 NIFD_SINFN  (P19066)   504 Enz:1    Cy  Nitrogenase Mo-Fe protein alpha           NITROGEN FIXATION; Id. to y4vL (nifD1)
y4xC nifK2 NIFK_SINFN  (P19067)   513 Enz:1    Cy  Nitrogenase Mo-Fe protein beta            NITROGEN FIXATION; Id. to y4vM (nifK1)
y4xD       Y4XD_SINFN  (P55695)   162 Unknown  Cy?                                           NITROGEN FIXATION ?; Sim. to nifX-nifW intergenic
                                                                                             Orf in N-fixing bacteria; Sim. to y4vQ
y4xE       Y4XE_SINFN  (P55696)    67 Unknown  Cy?                                           NITROGEN FIXATION ?; Sim. to nifX-nifW intergenic
                                                                                             Orf in N-fixing bacteria
y4xF       Y4XF_SINFN  (P55697)    58 Unknown  Cy?
y4xQ       Y4XQ_SINFN  (P55698)   100 TraReg?  Tm? Pu. exopolysaccharide production          Sim. to Rhizobium exoX
                                                   repressor
y4xG       Y4XG_SINFN  (P55699)   505 Unknown  Tm?
y4xH nodD2 NODD2_SINFN (P55700)   312 TraReg   Cy  lysR family H-T-H; regulates expression   NODULATION;
                                                   of nodABC                                 High sim. to nodD1
y4xI       Y4XI_SINFN  (P55701)   226 TraReg   Cy? Signal transduction-type regulator
y4xJ       Y4XJ_SINFN  (P55702)   423 Export?  Om? Secretion system (pulD family)            Sim. to y4yD (nolW)
y4xK       Y4XK_SINFN  (P55703)   188 Unknown  Lp?
y4xL nopL  NOPL_SINFN  (P55704)   338 Unknown  Se? Symbiotic effector                        NODULATION
y4xM       Y4XM_SINFN  (P55705)   404 Transp?  Tm  Permease-type protein                     Sim. to E.coli yceE and to tetracycline transporters
y4xN       Y4XN_SINFN  (P55706)   628 Enz:?    Cy?                                           Low sim. to E.coli pCOLV-K30 aerobactin synthase
                                                                                             subunit iucC
y4xO       Y4XO_SINFN  (P55707)   379 Unknown  Cy?
y4xP       Y4XP_SINFN  (P55708)   336 Enz:4    Cy? Pu. cysteine synthase
y4yA       Y4YA_SINFN  (P55709)   457 Unknown  Cy?
y4yB       Y4YB_SINFN  (P55710)   154 Unknown  Cy?
y4yC nopX  NOPX_SINFN  (P55711)   596 Unknown  Se                                           NODULATION
y4yD nolW  NOLW_SINFN  (P55712)   234 Export?  Tm? Secretion system (pulD family)            NODULATION; Sim. to y4xJ
y4yE nolB  NOLB_SINFN  (P55713)   164 Unknown  Cy?                                           NODULATION
y4yF nolT  NOLT_SINFN  (P55714)   289 Unknown  Lp                                            NODULATION
y4yG nolU  NOLU_SINFN  (P55715)   212 Unknown  Cy?                                           NODULATION
y4yH nolV  NOLV_SINFN  (P55716)   208 Unknown  Cy?                                           NODULATION
y4yI       Y4YI_SINFN  (P55717)   451 Export?  Cy  Pr. ATP synthase of a secretion system
                                      Enz:3
y4yJ       Y4YJ_SINFN  (P55718)   178 Unknown  Cy?
y4yK       Y4YK_SINFN  (P55719)   358 Export   Cy? Pr. secretion system protein              Belongs to fliN/mopA/spaO family
y4yL       Y4YL_SINFN  (P55720)   222 Export   Tm  Pr. secretion system protein              Belongs to fliP/mopC/spaP family
y4yM       Y4YM_SINFN  (P55721)    91 Export   Tm  Pr. secretion system protein              Belongs to fliQ/mopD/spaQ family
y4yN       Y4YN_SINFN  (P55722)   272 Export   Tm  Pr. secretion system protein              Belongs to fliR/mopE/spaR family
y4yO       Y4YO_SINFN  (P55723)   345 Export   Tm  Pr. secretion system protein              Belongs to flhB/hrpN/spaS family
y4yP nopP  NOPP_SINFN  (P55724)   271 Unknown  Se?                                           Sim. to R.fredii host-inducible protein A
y4yQ       Y4YQ_SINFN  (P55725)   296 Unknown  Tm?
y4yR       Y4YR_SINFN  (P55726)   697 Export   Tm  Pr. secretion system protein              Belongs to the FHIPEP family
y4yS       Y4YS_SINFN  (P55727)   182 Unknown  Tm?
y4zB       Y4ZB_SINFN  (P55729)   356 Int-Rec  Cy? Pu. transposase                           Sim. to Tpase IS4 family
y4zC       Y4ZC_SINFN  (P55730)   261 Enz      Cy?                                           Belongs to the peptidase C58 family
y4zD       Y4ZD_SINFN  (P55731)    49 Unknown  Cy?
y4zF syrM2 SYRM2_SINFN (P55733)   339 TraReg   Cy  lysR family H-T-H regulator               High sim. to syrM1
____ _____ ____________________ _____ ________ ___ ______________________________________    _______________________________________


Legend for the function class:

CellDev  Cell and/or plasmid control and development
Chemot   Chemotaxis
E-trans  Electron transport
Enz:1    Enzyme, oxidoreductase
Enz:2    Enzyme, transferase
Enz:3    Enzyme, hydrolase
Enz:4    Enzyme, lyase
Enz:5    Enzyme, isomerase
Enz:6    Enzyme, ligase
Export   Protein export system
Int-Rec  Involved in integration/recombination
TraReg   Transcription regulation
Transp   Transport
Unknown  Not obvious, either because there is no similarity to a characterized
         protein or because the similarity is too low to infer a putative
         function


Legend for the subcellular location:

Cy: cytoplasmic
Om: outer membrane
Pe: periplasmic
Lp: lipoprotein attached to either inner or outer membrane
Tm: transmembrane in inner membrane
Se: secreted


Abbreviations:

Id   : Identical
Pr   : Probable
Pu   : Putative
Sim  : Similar
C-ter: C-terminal
N-ter: N-terminal

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