humchry.txt
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UniProt - Swiss-Prot Protein Knowledgebase
Swiss Institute of Bioinformatics (SIB); Geneva, Switzerland
European Bioinformatics Institute (EBI); Hinxton, United Kingdom
Protein Information Resource (PIR); Washington DC, USA
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Description: Human chromosome Y: entries, gene names and
cross-references to MIM
Name: humchry.txt
Release: 2012_01 of 25-Jan-2012
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This documents lists all the human protein sequence entries whose genes
are known to be encoded on chromosome Y in this release of UniProtKB/Swiss-Prot.
Number of UniProtKB/Swiss-Prot entries encoded on chromosome Y: 47
Reference for the chromosome sequence:
Nature 423:825-837(2003).
[Pubmed: 12815422] [Article from publisher]
For more information on chromosome Y see:
Ensembl : http://www.ensembl.org/Homo_sapiens/mapview?chr=Y
NCBI : http://www.ncbi.nlm.nih.gov/mapview/maps.cgi?taxid=9606&chr=Y
OMIM : http://www.ncbi.nlm.nih.gov/Omim/getmap.cgi?chromosome=Y
euGenes : http://iubio.bio.indiana.edu:8089/.bin/gnomap?spp=man&chr=Y
DOE : http://www.ornl.gov/sci/techresources/Human_Genome/launchpad/chromY.shtml
_______ _______________ __________________ ______ ______________________
Gene Chromosomal Swiss-Prot MIM Description
name position AC Entry name code
_______ _______________ __________________ ______ ______________________
AMELY Yp11.2 Q99218 AMELY_HUMAN 410000 Amelogenin, Y isoform precursor [AMGL] [AMGY]
BCORP1 Yq11.222 Q8N888 BCOR2_HUMAN Putative BCoR-like protein 2 (BCL-6 corepressor pseudogene 1) (BCL-6 corepressor-like protein 2) [BCORL2]
BPY2 Yq11 O14599 VCY2_HUMAN 400013 Testis-specific basic protein Y 2 (Basic charge, Y-linked 2) (Variably charged protein Y 2) [BPY2A] [VCY2] [VCY2A]
BPY2B Yq11.223 O14599 VCY2_HUMAN Testis-specific basic protein Y 2 (Basic charge, Y-linked 2) (Variably charged protein Y 2) [VCY2B]
BPY2C Yq11.223 O14599 VCY2_HUMAN Testis-specific basic protein Y 2 (Basic charge, Y-linked 2) (Variably charged protein Y 2) [VCY2C]
CDY1 Yq11.23 Q9Y6F8 CDY1_HUMAN 400016 Testis-specific chromodomain protein Y 1 (EC 2.3.1.48) [CDY1A]
CDY1B Yq11.23 Q9Y6F8 CDY1_HUMAN Testis-specific chromodomain protein Y 1 (EC 2.3.1.48)
CDY2A Yq11.221 Q9Y6F7 CDY2_HUMAN 400018 Testis-specific chromodomain protein Y 2 (EC 2.3.1.48) [CDY2]
CDY2B Yq11.221 Q9Y6F7 CDY2_HUMAN Testis-specific chromodomain protein Y 2 (EC 2.3.1.48)
CYorf15B Yq11.222 Q9BZA4 CY15B_HUMAN 400032 Putative gamma-taxilin-like protein CYorf15B (Lipopolysaccaride-specific response 5-like protein)
CYorf17 Yq11.223 Q9H606 CY017_HUMAN Putative uncharacterized protein CYorf17
DAZ1 Yq11.23 Q9NQZ3 DAZ1_HUMAN 400003 Deleted in azoospermia protein 1 [DAZ] [SPGY]
DAZ2 Yq11.23 Q13117 DAZ2_HUMAN 400026 Deleted in azoospermia protein 2
DAZ3 Yq11.23 Q9NR90 DAZ3_HUMAN 400027 Deleted in azoospermia protein 3
DAZ4 Yq11.23 Q86SG3 DAZ4_HUMAN 400003 Deleted in azoospermia protein 4
DDX3Y Yq11 O15523 DDX3Y_HUMAN 400010 ATP-dependent RNA helicase DDX3Y (EC 3.6.4.13) (DEAD box protein 3, Y-chromosomal) [DBY]
EIF1AY Yq11.222 O14602 IF1AY_HUMAN 400014 Eukaryotic translation initiation factor 1A, Y-chromosomal (eIF-1A Y isoform) (Eukaryotic translation initiation factor 4C) (eIF-4C)
HSFY1 Yq11.221 Q96LI6 HSFY1_HUMAN 400029 Heat shock transcription factor, Y-linked (Heat shock transcription factor 2-like protein) (HSF2-like) [HSF2L] [HSFY]
HSFY2 Yq11.221 Q96LI6 HSFY1_HUMAN Heat shock transcription factor, Y-linked (Heat shock transcription factor 2-like protein) (HSF2-like) [HSF2L] [HSFY]
KDM5D Yq11 Q9BY66 KDM5D_HUMAN 426000 Lysine-specific demethylase 5D (EC 1.14.11.-) (Histocompatibility Y antigen) (H-Y) (Histone demethylase JARID1D) (Jumonji/ARID domain-containing protein 1D) (Protein SmcY) [HY] [HYA] [JARID1D] [KIAA0234] [SMCY]
NLGN4Y Yq11.221 Q8NFZ3 NLGNY_HUMAN 400028 Neuroligin-4, Y-linked precursor (Neuroligin Y) [KIAA0951]
PCDH11Y Yp11.2 Q9BZA8 PC11Y_HUMAN 400022 Protocadherin-11 Y-linked precursor (Protocadherin-11) (Protocadherin on the Y chromosome) (PCDH-Y) (Protocadherin prostate cancer) (Protocadherin-PC) (Protocadherin-22) [PCDH11] [PCDH22] [PCDHY]
PRKY Yp11.2 O43930 PRKY_HUMAN 400008 Serine/threonine-protein kinase PRKY (EC 2.7.11.1)
PRY Yq11.223 O14603 PRY_HUMAN 400041 PTPN13-like protein, Y-linked (Testis-specific PTP-BL-related Y protein) [PRY1] [PTPN13LY]
PRY2 Yq11.223 O14603 PRY_HUMAN 400019 PTPN13-like protein, Y-linked (Testis-specific PTP-BL-related Y protein) [PTPN13LY2]
PRYP3 Yq11.223 O14603 PRY_HUMAN PTPN13-like protein, Y-linked (Testis-specific PTP-BL-related Y protein)
PRYP4 Yq11.23 O14603 PRY_HUMAN PTPN13-like protein, Y-linked (Testis-specific PTP-BL-related Y protein)
RBMY1A1 Yq11.23 Q15414 RBY1A_HUMAN 400006 RNA-binding motif protein, Y chromosome, family 1 member A1/C (RNA-binding motif protein 1) (RNA-binding motif protein 2) (Y chromosome RNA recognition motif 1) (hRBMY) [RBM1] [RBM2] [YRRM1] [YRRM2]
RBMY1B Yq11.223 A6NDE4 RBY1B_HUMAN RNA-binding motif protein, Y chromosome, family 1 member B
RBMY1C Yq11.23 Q15414 RBY1A_HUMAN RNA-binding motif protein, Y chromosome, family 1 member A1/C (RNA-binding motif protein 1) (RNA-binding motif protein 2) (Y chromosome RNA recognition motif 1) (hRBMY)
RBMY1D Yq11.223 P0C7P1 RBY1D_HUMAN RNA-binding motif protein, Y chromosome, family 1 member D
RBMY1E Yq11.223 A6NEQ0 RBY1E_HUMAN RNA-binding motif protein, Y chromosome, family 1 member E
RBMY1F Yq11.223 Q15415 RBY1F_HUMAN 400006 RNA-binding motif protein, Y chromosome, family 1 member F/J (Y chromosome RNA recognition motif 2) [YRRM2]
RBMY1J Yq11.223 Q15415 RBY1F_HUMAN RNA-binding motif protein, Y chromosome, family 1 member F/J (Y chromosome RNA recognition motif 2)
RPS4Y1 Yp11.3 P22090 RS4Y1_HUMAN 470000 40S ribosomal protein S4, Y isoform 1 [RPS4Y] [PRO2646]
RPS4Y2 Yq11.223 Q8TD47 RS4Y2_HUMAN 400030 40S ribosomal protein S4, Y isoform 2 [RPS4Y2P]
SRY Yp11.3 Q05066 SRY_HUMAN 480000 Sex-determining region Y protein (Testis-determining factor) [TDF]
TBL1Y Yp11.2 Q9BQ87 TBL1Y_HUMAN 400033 F-box-like/WD repeat-containing protein TBL1Y (Transducin beta-like protein 1Y) (Transducin-beta-like protein 1, Y-linked) [TBL1]
TGIF2LY Yp11.2 Q8IUE0 TF2LY_HUMAN 400025 Homeobox protein TGIF2LY (TGF-beta-induced transcription factor 2-like protein) (TGFB-induced factor 2-like protein, Y-linked) (TGIF-like on the Y) [TGIFLY]
TMSB4Y Yq11.221 O14604 TYB4Y_HUMAN 400017 Thymosin beta-4, Y-chromosomal [TB4Y]
TSPY1 Yp11.2 Q01534 TSPY1_HUMAN 480100 Testis-specific Y-encoded protein 1 (Cancer/testis antigen 78) (CT78) [TSPY]
TSPY10 Yp11.2 P0CW01 TSPYA_HUMAN Testis-specific Y-encoded protein 10
TSPY2 Yp11.2 A6NKD2 TSPY2_HUMAN Testis-specific Y-encoded protein 2 (Testis-specific Y-encoded protein Q1) [TSPYQ1]
TSPY3 Yp11.2 P0CV98 TSPY3_HUMAN Testis-specific Y-encoded protein 3
TSPY4 Yp11.2 P0CV99 TSPY4_HUMAN Testis-specific Y-encoded protein 4
TSPY8 Yp11.2 P0CW00 TSPY8_HUMAN Testis-specific Y-encoded protein 8
TTTY10 Yp11.2 Q9BZA0 TTY10_HUMAN Putative transcript Y 10 protein [TTY10]
TTTY12 Yp11.2 Q9BZ98 TTY12_HUMAN Putative transcript Y 12 protein [TTY12]
TTTY13 Yq11.223 Q9BZ97 TTY13_HUMAN Putative transcript Y 13 protein [TTY13]
TXLNG2P Yq11.222 Q9BZA5 TXNG2_HUMAN 400031 Putative gamma-taxilin 2 (Gamma-taxilin 2 pseudogene) [CYorf15A]
USP9Y Yq11.2 O00507 USP9Y_HUMAN 400005 Probable ubiquitin carboxyl-terminal hydrolase FAF-Y (EC 3.4.19.12) (Deubiquitinating enzyme FAF-Y) (Fat facets protein-related, Y-linked) (Ubiquitin thiolesterase FAF-Y) (Ubiquitin-specific protease 9, Y chromosome) (Ubiquitin-specific-processing protease FAF-Y) [DFFRY]
UTY Yq11 O14607 UTY_HUMAN 400009 Histone demethylase UTY (EC 1.14.11.-) (Ubiquitously-transcribed TPR protein on the Y chromosome) (Ubiquitously-transcribed Y chromosome tetratricopeptide repeat protein)
VCY Yq11.221 O14598 VCY1_HUMAN 400012 Testis-specific basic protein Y 1 (Basic charge, Y-linked 1) (Variably charged protein Y) [BPY1] [VCY1A]
VCY1B Yq11.221 O14598 VCY1_HUMAN Testis-specific basic protein Y 1 (Basic charge, Y-linked 1) (Variably charged protein Y) [BPY1B]
XKRY Yq11.221 O14609 XKRY_HUMAN 400015 Testis-specific XK-related protein, Y-linked [XKRY1]
XKRY2 Yq11.221 A2RUG3 XKRY2_HUMAN Testis-specific XK-related protein, Y-linked 2
ZFY Yp11.3 P08048 ZFY_HUMAN 490000 Zinc finger Y-chromosomal protein
- Yq11.1 A6NJY1 SL9BL_HUMAN Putative protein SLC9B1-like 1
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