1 - 25 of 33 results for author:"de Vries R.P." in Literature citations
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| Genome sequence of the button mushroom Agaricus bisporus reveals mechanisms governing adaptation to a humic-rich ecological niche. Morin E., Kohler A., Baker A.R., Foulongne-Oriol M., Lombard V., Nagy L.G., Ohm R.A., Patyshakuliyeva A., Brun A., Aerts A.L. et al. Proc. Natl. Acad. Sci. U.S.A. 109:17501-17506(2012) · UniProtKB (21,608) |
| Comparative genomics of the white-rot fungi, Phanerochaete carnosa and P. chrysosporium, to elucidate the genetic basis of the distinct wood types they colonize. Suzuki H., MacDonald J., Syed K., Salamov A., Hori C., Aerts A., Henrissat B., Wiebenga A., VanKuyk P.A., Barry K. et al. BMC Genomics 13:444-444(2012) · UniProtKB (13,867) |
| The Paleozoic origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes. Floudas D., Binder M., Riley R., Barry K., Blanchette R.A., Henrissat B., Martinez A.T., Otillar R., Spatafora J.W., Yadav J.S. et al. Science 336:1715-1719(2012) · UniProtKB (5,290) |
| Comparative genomic analysis of the thermophilic biomass-degrading fungi Myceliophthora thermophila and Thielavia terrestris. Berka R.M., Grigoriev I.V., Otillar R., Salamov A., Grimwood J., Reid I., Ishmael N., John T., Darmond C., Moisan M.-C. et al. Nat. Biotechnol. 29:922-927(2011) · UniProtKB (18,841) |
| Genomic analysis of the necrotrophic fungal pathogens Sclerotinia sclerotiorum and Botrytis cinerea. Amselem J., Cuomo C.A., van Kan J.A.L., Viaud M., Benito E.P., Couloux A., Coutinho P.M., de Vries R.P., Dyer P.S., Fillinger S. et al. PLoS Genet. 7:E1002230-E1002230(2011) · UniProtKB (30,880) |
| The plant cell wall-decomposing machinery underlies the functional diversity of forest fungi. Eastwood D.C., Floudas D., Binder M., Majcherczyk A., Schneider P., Aerts A., Asiegbu F.O., Baker S.E., Barry K., Bendiksby M. et al. Science 333:762-765(2011) · UniProtKB (27,061) |
| Finished genome of the fungal wheat pathogen Mycosphaerella graminicola reveals dispensome structure, chromosome plasticity, and stealth pathogenesis. Goodwin S.B., Ben M'barek S., Dhillon B., Wittenberg A.H.J., Crane C.F., Hane J.K., Foster A.J., Van der Lee T.A.J., Grimwood J., Aerts A. et al. PLoS Genet. 7:E1002070-E1002070(2011) · UniProtKB (10,950) |
| The alpha-glucuronidase Agu1 from Schizophyllum commune is a member of a novel glycoside hydrolase family (GH115). Chong S.L., Battaglia E., Coutinho P.M., Henrissat B., Tenkanen M., de Vries R.P. Appl. Microbiol. Biotechnol. 90:1323-1332(2011) · UniProtKB (1) |
| Genome sequence of the necrotrophic plant pathogen Pythium ultimum reveals original pathogenicity mechanisms and effector repertoire. Levesque C.A., Brouwer H., Cano L., Hamilton J.P., Holt C., Huitema E., Raffaele S., Robideau G.P., Thines M., Win J. et al. Genome Biol. 11:R73-R73(2010) · UniProtKB (42) |
| Genome sequence of the model mushroom Schizophyllum commune. Ohm R.A., de Jong J.F., Lugones L.G., Aerts A., Kothe E., Stajich J.E., de Vries R.P., Record E., Levasseur A., Baker S.E. et al. Nat. Biotechnol. 28:957-963(2010) · UniProtKB (13,128) |
| A single amino acid change (Y318F) in the L-arabitol dehydrogenase (LadA) from Aspergillus niger results in a significant increase in affinity for D-sorbitol. Rutten L., Ribot C., Trejo-Aguilar B., Wosten H.A., de Vries R.P. BMC Microbiol. 9:166-166(2009) · UniProtKB (1) |
| The 2008 update of the Aspergillus nidulans genome annotation: a community effort. Wortman J.R., Gilsenan J.M., Joardar V., Deegan J., Clutterbuck J., Andersen M.R., Archer D., Bencina M., Braus G., Coutinho P. et al. Fungal Genet. Biol. 46:S2-13(2009) · UniProtKB (10,535) |
| The genome sequence of the model ascomycete fungus Podospora anserina. Espagne E., Lespinet O., Malagnac F., Da Silva C., Jaillon O., Porcel B.M., Couloux A., Aury J.-M., Segurens B., Poulain J. et al. Genome Biol. 9:R77.1-R77.22(2008) · UniProtKB (10,450) |
| Spatial differentiation in the vegetative mycelium of Aspergillus niger. Levin A.M., de Vries R.P., Conesa A., de Bekker C., Talon M., Menke H.H., van Peij N.N., Wosten H.A. Eukaryot. Cell 6:2311-2322(2007) · UniProtKB (1) |
| Identification of genes encoding microbial glucuronoyl esterases. Li X.L., Spanikova S., de Vries R.P., Biely P. FEBS Lett. 581:4029-4035(2007) · UniProtKB (1) |
| Genome sequencing and analysis of the versatile cell factory Aspergillus niger CBS 513.88. Pel H.J., de Winde J.H., Archer D.B., Dyer P.S., Hofmann G., Schaap P.J., Turner G., de Vries R.P., Albang R., Albermann K. et al. Nat. Biotechnol. 25:221-231(2007) · UniProtKB (14,074) |
| Aspergillus vadensis, a new species of the group of black Aspergilli. de Vries R.P., Frisvad J.C., van de Vondervoort P.J., Burgers K., Kuijpers A.F., Samson R.A., Visser J. Antonie Van Leeuwenhoek 87:195-203(2005) · UniProtKB (11) |
| Mannitol is required for stress tolerance in Aspergillus niger conidiospores. Ruijter G.J.G., Bax M., Patel H., Flitter S.J., van de Vondervoort P.J.I., de Vries R.P., vanKuyk P.A., Visser J. Eukaryot. Cell 2:690-698(2003) · UniProtKB (1) |
| Glycerol dehydrogenase, encoded by gldB is essential for osmotolerance in Aspergillus nidulans. de Vries R.P., Flitter S.J., van de Vondervoort P.J., Chaveroche M.K., Fontaine T., Fillinger S., Ruijter G.J., d'Enfert C., Visser J. Mol. Microbiol. 49:131-141(2003) · UniProtKB (1) |
| Expression profiling of pectinolytic genes from Aspergillus niger. de Vries R.P., Jansen J., Aguilar G., Paenicova L., Joosten J.A.E., Wulfert F., Visser J. FEBS Lett. 530:41-47(2002) · UniProtKB (2) |
| Endogalactanase A from Aspergillus niger is specifically induced on L-arabinose and galacturonic acid and plays an important role in the degradation of pectic hairy regions. de Vries R.P., Paenicova L., Hinz S., Kester H.C.M., Benen J.A.E., Beldman G.A., Visser J. Eur. J. Biochem. 269:4985-4993(2002) · UniProtKB (1) |
| Regulation of the a-glucuronidase encoding gene (aguA) from Aspergillus niger. de Vries R.P., van de Vondervoort P.J.I., Hendriks L., van de Belt M., Visser J.V. Mol. Genet. Genomics 268:96-102(2002) · UniProtKB (2) |
| The Aspergillus niger faeB gene encodes a second feruloyl esterase involved in pectin and xylan degradation and is specifically induced in the presence of aromatic compounds. de Vries R.P., vanKuyk P.A., Kester H.C., Visser J. Biochem. J. 363:377-386(2002) · UniProtKB (2) |
| The Aspergillus niger D-xylulose kinase gene is co-expressed with genes encoding arabinan degrading enzymes, and is essential for growth on D-xylose and L-arabinose. vanKuyk P.A., de Groot M.J., Ruijter G.J., de Vries R.P., Visser J. Eur. J. Biochem. 268:5414-5423(2001) · UniProtKB (1) |
| Cloning and characterization of Aspergillus niger genes encoding an alpha-galactosidase and a beta-mannosidase involved in galactomannan degradation. Ademark P., de Vries R.P., Haegglund P., Staalbrand H., Visser J. Eur. J. Biochem. 268:2982-2990(2001) · UniProtKB (2) |