1 - 25 of 30 results for author:"Wortman J.R." in Literature citations
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| Genomic epidemiology of the Escherichia coli O104:H4 outbreaks in Europe, 2011. Grad Y.H., Lipsitch M., Feldgarden M., Arachchi H.M., Cerqueira G.C., Fitzgerald M., Godfrey P., Haas B.J., Murphy C.I., Russ C. et al. Proc. Natl. Acad. Sci. U.S.A. 109:3065-3070(2012) · UniProtKB (66,043) |
| Draft genome sequence of the oilseed species Ricinus communis. Chan A.P., Crabtree J., Zhao Q., Lorenzi H., Orvis J., Puiu D., Melake-Berhan A., Jones K.M., Redman J., Chen G. et al. Nat. Biotechnol. 28:951-956(2010) · UniProtKB (31,140) |
| A catalog of reference genomes from the human microbiome. Nelson K.E., Weinstock G.M., Highlander S.K., Worley K.C., Creasy H.H., Wortman J.R., Rusch D.B., Mitreva M., Sodergren E., Chinwalla A.T. et al. Science 328:994-999(2010) · UniProtKB (2,264) |
| Comparative genomic analyses of the human fungal pathogens Coccidioides and their relatives. Sharpton T.J., Stajich J.E., Rounsley S.D., Gardner M.J., Wortman J.R., Jordar V.S., Maiti R., Kodira C.D., Neafsey D.E., Zeng Q. et al. Genome Res. 19:1722-1731(2009) · UniProtKB (33,944) |
| The 2008 update of the Aspergillus nidulans genome annotation: a community effort. Wortman J.R., Gilsenan J.M., Joardar V., Deegan J., Clutterbuck J., Andersen M.R., Archer D., Bencina M., Braus G., Coutinho P. et al. Fungal Genet. Biol. 46:S2-13(2009) · UniProtKB (10,535) |
| Comparative genomics of the neglected human malaria parasite Plasmodium vivax. Carlton J.M., Adams J.H., Silva J.C., Bidwell S.L., Lorenzi H., Caler E., Crabtree J., Angiuoli S.V., Merino E.F., Amedeo P. et al. Nature 455:757-763(2008) · UniProtKB (5,386) |
| Genome sequencing and analysis of the filamentous fungus Penicillium chrysogenum. van den Berg M.A., Albang R., Albermann K., Badger J.H., Daran J.-M., Driessen A.J.M., Garcia-Estrada C., Fedorova N.D., Harris D.M., Heijne W.H.M. et al. Nat. Biotechnol. 26:1161-1168(2008) · UniProtKB (12,773) |
| Genomic islands in the pathogenic filamentous fungus Aspergillus fumigatus. Fedorova N.D., Khaldi N., Joardar V.S., Maiti R., Amedeo P., Anderson M.J., Crabtree J., Silva J.C., Badger J.H., Albarraq A. et al. PLoS Genet. 4:E1000046-E1000046(2008) · UniProtKB (29,435) |
| Genome sequence of Babesia bovis and comparative analysis of apicomplexan hemoprotozoa. Brayton K.A., Lau A.O.T., Herndon D.R., Hannick L., Kappmeyer L.S., Berens S.J., Bidwell S.L., Brown W.C., Crabtree J., Fadrosh D. et al. PLoS Pathog. 3:1401-1413(2007) · UniProtKB (3,690) |
| Draft genome of the filarial nematode parasite Brugia malayi. Ghedin E., Wang S., Spiro D., Caler E., Zhao Q., Crabtree J., Allen J.E., Delcher A.L., Guiliano D.B., Miranda-Saavedra D. et al. Science 317:1756-1760(2007) · UniProtKB (11,350) |
| Genome sequence of Aedes aegypti, a major arbovirus vector. Nene V., Wortman J.R., Lawson D., Haas B.J., Kodira C.D., Tu Z.J., Loftus B.J., Xi Z., Megy K., Grabherr M. et al. Science 316:1718-1723(2007) · UniProtKB (16,646) |
| Draft genome sequence of the sexually transmitted pathogen Trichomonas vaginalis. Carlton J.M., Hirt R.P., Silva J.C., Delcher A.L., Schatz M., Zhao Q., Wortman J.R., Bidwell S.L., Alsmark U.C.M., Besteiro S. et al. Science 315:207-212(2007) · UniProtKB (50,191) |
| Macronuclear genome sequence of the ciliate Tetrahymena thermophila, a model eukaryote. Eisen J.A., Coyne R.S., Wu M., Wu D., Thiagarajan M., Wortman J.R., Badger J.H., Ren Q., Amedeo P., Jones K.M. et al. PLoS Biol. 4:1620-1642(2006) · UniProtKB (24,698) |
| Comparative genomics of Brassica oleracea and Arabidopsis thaliana reveal gene loss, fragmentation, and dispersal after polyploidy. Town C.D., Cheung F., Maiti R., Crabtree J., Haas B.J., Wortman J.R., Hine E.E., Althoff R., Arbogast T.S., Tallon L.J. et al. Plant Cell 18:1348-1359(2006) · Mapped (46) |
| Genome sequencing and analysis of Aspergillus oryzae. Machida M., Asai K., Sano M., Tanaka T., Kumagai T., Terai G., Kusumoto K., Arima T., Akita O., Kashiwagi Y. et al. Nature 438:1157-1161(2005) · UniProtKB (12,055) |
| Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus. Nierman W.C., Pain A., Anderson M.J., Wortman J.R., Kim H.S., Arroyo J., Berriman M., Abe K., Archer D.B., Bermejo C. et al. Nature 438:1151-1156(2005) · UniProtKB (9,629) |
| Sequencing of Aspergillus nidulans and comparative analysis with A. fumigatus and A. oryzae. Galagan J.E., Calvo S.E., Cuomo C., Ma L.-J., Wortman J.R., Batzoglou S., Lee S.-I., Bastuerkmen M., Spevak C.C., Clutterbuck J. et al. Nature 438:1105-1115(2005) · UniProtKB (12,695) |
| Comparative genomics of trypanosomatid parasitic protozoa. El-Sayed N.M.A., Myler P.J., Blandin G., Berriman M., Crabtree J., Aggarwal G., Caler E., Renauld H., Worthey E.A., Hertz-Fowler C. et al. Science 309:404-409(2005) · UniProtKB (3,757) |
| Genome sequence of Theileria parva, a bovine pathogen that transforms lymphocytes. Gardner M.J., Bishop R., Shah T., de Villiers E.P., Carlton J.M., Hall N., Ren Q., Paulsen I.T., Pain A., Berriman M. et al. Science 309:134-137(2005) · UniProtKB (4,068) |
| Whole genome shotgun sequencing of Brassica oleracea and its application to gene discovery and annotation in Arabidopsis. Ayele M., Haas B.J., Kumar N., Wu H., Xiao Y., Van Aken S., Utterback T.R., Wortman J.R., White O.R., Town C.D. |
| Complete reannotation of the Arabidopsis genome: methods, tools, protocols and the final release. Haas B.J., Wortman J.R., Ronning C.M., Hannick L.I., Smith R.K. Jr., Maiti R., Chan A.P., Yu C., Farzad M., Wu D. et al. BMC Biol. 3:7-7(2005) · Mapped (8) |
| The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans. Loftus B.J., Fung E., Roncaglia P., Rowley D., Amedeo P., Bruno D., Vamathevan J., Miranda M., Anderson I.J., Fraser J.A. et al. Science 307:1321-1324(2005) · UniProtKB (13,005) |
| Improving the Arabidopsis genome annotation using maximal transcript alignment assemblies. Haas B.J., Delcher A.L., Mount S.M., Wortman J.R., Smith R.K. Jr., Hannick L.I., Maiti R., Ronning C.M., Rusch D.B., Town C.D. et al. Nucleic Acids Res. 31:5654-5666(2003) · Mapped (3) |
| Annotation of the Arabidopsis genome. Wortman J.R., Haas B.J., Hannick L.I., Smith R.K. Jr., Maiti R., Ronning C.M., Chan A.P., Yu C., Ayele M., Whitelaw C.A. et al. Plant Physiol. 132:461-468(2003) · Mapped (1) |
| The genome sequence of the malaria mosquito Anopheles gambiae. Holt R.A., Subramanian G.M., Halpern A., Sutton G.G., Charlab R., Nusskern D.R., Wincker P., Clark A.G., Ribeiro J.M.C., Wides R. et al. Science 298:129-149(2002) · UniProtKB (13,522) |