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Evolutionary capture of viral and plasmid DNA by yeast nuclear chromosomes.

Frank A.C., Wolfe K.H.

Eukaryotic Cell 8:1521-1531(2009) · Mapped (4)

Additions, losses, and rearrangements on the evolutionary route from a reconstructed ancestor to the modern Saccharomyces cerevisiae genome.

Gordon J.L., Byrne K.P., Wolfe K.H.

PLoS Genet. 5:e1000485-e1000485(2009) · Mapped (77)

Elaboration, diversification and regulation of the sir1 family of silencing proteins in Saccharomyces.

Gallagher J.E.G., Babiarz J.E., Teytelman L., Wolfe K.H., Rine J.

Genetics 181:1477-1491(2009) · UniProtKB (3) · Mapped (6)

Recent allopolyploid origin of Zygosaccharomyces rouxii strain ATCC 42981.

Gordon J.L., Wolfe K.H.

Yeast 25:449-456(2008) · UniProtKB (65)

Genomic islands in the pathogenic filamentous fungus Aspergillus fumigatus.

Fedorova N.D., Khaldi N., Joardar V.S., Maiti R., Amedeo P., Anderson M.J., Crabtree J., Silva J.C., Badger J.H., Albarraq A. et al.

PLoS Genet. 4:E1000046-E1000046(2008) · UniProtKB (29,446)

Increased glycolytic flux as an outcome of whole-genome duplication in yeast.

Conant G.C., Wolfe K.H.

Mol. Syst. Biol. 3:129-129(2007) · Mapped (22)

Positive darwinian selection at the imprinted MEDEA locus in plants.

Spillane C., Schmid K.J., Laoueille-Duprat S., Pien S., Escobar-Restrepo J.M., Baroux C., Gagliardini V., Page D.R., Wolfe K.H., Grossniklaus U.

Nature 448:349-352(2007) · UniProtKB (34) · Mapped (1)

Independent sorting-out of thousands of duplicated gene pairs in two yeast species descended from a whole-genome duplication.

Scannell D.R., Frank A.C., Conant G.C., Byrne K.P., Woolfit M., Wolfe K.H.

Proc. Natl. Acad. Sci. U.S.A. 104:8397-8402(2007) · UniProtKB (5,353)

When gene marriages don't work out: divorce by subfunctionalization.

Cusack B.P., Wolfe K.H.

Trends Genet. 23:270-272(2007) · UniProtKB (2)

Genome survey sequencing of the wine spoilage yeast Dekkera (Brettanomyces) bruxellensis.

Woolfit M., Rozpedowska E., Piskur J., Wolfe K.H.

Eukaryotic Cell 6:721-733(2007) · UniProtKB (17)

Gene duplication, exon gain and neofunctionalization of OEP16-related genes in land plants.

Drea S.C., Lao N.T., Wolfe K.H., Kavanagh T.A.

Plant J. 46:723-735(2006) · Mapped (8)

Complete DNA sequences of the mitochondrial genomes of the pathogenic yeasts Candida orthopsilosis and Candida metapsilosis: insight into the evolution of linear DNA genomes from mitochondrial telomere mutants.

Kosa P., Valach M., Tomaska L., Wolfe K.H., Nosek J.

Nucleic Acids Res. 34:2472-2481(2006) · UniProtKB (60)

Birth of a metabolic gene cluster in yeast by adaptive gene relocation.

Wong S., Wolfe K.H.

Nat. Genet. 37:777-782(2005) · Mapped (8)

A genome sequence survey shows that the pathogenic yeast Candida parapsilosis has a defective MTLa1 allele at its mating type locus.

Logue M.E., Wong S., Wolfe K.H., Butler G.

Eukaryotic Cell 4:1009-1017(2005) · UniProtKB (23)

Origins of recently gained introns in Caenorhabditis.

Coghlan A., Wolfe K.H.

Proc. Natl. Acad. Sci. U.S.A. 101:11362-11367(2004) · Mapped (8)

Evolution of the MAT locus and its Ho endonuclease in yeast species.

Butler G., Kenny C., Fagan A., Kurischko C., Gaillardin C., Wolfe K.H.

Proc. Natl. Acad. Sci. U.S.A. 101:1632-1637(2004) · UniProtKB (46) · Mapped (5)

Positive selection and subfunctionalization of duplicated CCT chaperonin subunits.

Fares M.A., Wolfe K.H.

Mol. Biol. Evol. 20:1588-1597(2003) · Mapped (8)

Evidence from comparative genomics for a complete sexual cycle in the 'asexual' pathogenic yeast Candida glabrata.

Wong S., Fares M.A., Zimmermann W., Butler G., Wolfe K.H.

Genome Biol. 4:R10.1-R10.9(2003) · UniProtKB (30) · Mapped (3)

Evolutionary re-organisation of a large operon in adzuki bean chloroplast DNA caused by inverted repeat movement.

Perry A.S., Brennan S., Murphy D.J., Kavanagh T.A., Wolfe K.H.

DNA Res. 9:157-162(2002) · UniProtKB (11)

Genomic differences between Candida glabrata and Saccharomyces cerevisiae around the MRPL28 and GCN3 loci.

Walsh D.W., Wolfe K.H., Butler G.

Yeast 19:991-994(2002) · UniProtKB (13) · Mapped (6)

Gene order evolution and paleopolyploidy in hemiascomycete yeasts.

Wong S., Butler G., Wolfe K.H.

Proc. Natl. Acad. Sci. U.S.A. 99:9272-9277(2002) · UniProtKB (10) · Mapped (2)

Many parallel losses of infA from chloroplast DNA during angiosperm evolution with multiple independent transfers to the nucleus.

Millen R.S., Olmstead R.G., Adams K.L., Palmer J.D., Lao N.T., Heggie L., Kavanagh T.A., Hibberd J.M., Gray J.C., Morden C.W. et al.

Plant Cell 13:645-658(2001) · UniProtKB (28) · Mapped (1)

A subset of conserved tRNA genes in plastid DNA of nongreen plants.

Lohan A.J., Wolfe K.H.

Genetics 150:425-433(1998) · UniProtKB (3)

Evolution of gene order and chromosome number in Saccharomyces, Kluyveromyces and related fungi.

Keogh R.S., Seoighe C., Wolfe K.H.

Yeast 14:443-457(1998) · UniProtKB (2)

Molecular evidence for an ancient duplication of the entire yeast genome.

Wolfe K.H., Shields D.C.

Nature 387:708-713(1997) · Mapped (1)

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