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Comparative genomics of protoploid Saccharomycetaceae.

Souciet J.-L., Dujon B., Gaillardin C., Johnston M., Baret P.V., Cliften P., Sherman D.J., Weissenbach J., Westhof E., Wincker P. et al.

Genome Res. 19:1696-1709(2009) · UniProtKB (10,065)

Methylobacterium genome sequences: a reference blueprint to investigate microbial metabolism of C1 compounds from natural and industrial sources.

Vuilleumier S., Chistoserdova L., Lee M.-C., Bringel F., Lajus A., Zhou Y., Gourion B., Barbe V., Chang J., Cruveiller S. et al.

PLoS ONE 4:E5584-E5584(2009) · UniProtKB (6,236)

A placenta-specific receptor for the fusogenic, endogenous retrovirus-derived, human syncytin-2.

Esnault C., Priet S., Ribet D., Vernochet C., Bruls T., Lavialle C., Weissenbach J., Heidmann T.

Proc. Natl. Acad. Sci. U.S.A. 105:17532-17537(2008) · Mapped (6)

The Phaeodactylum genome reveals the evolutionary history of diatom genomes.

Bowler C., Allen A.E., Badger J.H., Grimwood J., Jabbari K., Kuo A., Maheswari U., Martens C., Maumus F., Otillar R.P. et al.

Nature 456:239-244(2008) · UniProtKB (21,948)

The genome sequence of the model ascomycete fungus Podospora anserina.

Espagne E., Lespinet O., Malagnac F., Da Silva C., Jaillon O., Porcel B.M., Couloux A., Aury J.-M., Segurens B., Poulain J. et al.

Genome Biol. 9:R77.1-R77.22(2008) · UniProtKB (10,446)

Comparative analysis of Acinetobacters: three genomes for three lifestyles.

Vallenet D., Nordmann P., Barbe V., Poirel L., Mangenot S., Bataille E., Dossat C., Gas S., Kreimeyer A., Lenoble P. et al.

PLoS ONE 3:E1805-E1805(2008) · UniProtKB (6,419)

"Candidatus Cloacamonas acidaminovorans": genome sequence reconstruction provides a first glimpse of a new bacterial division.

Pelletier E., Kreimeyer A., Bocs S., Rouy Z., Gyapay G., Chouari R., Riviere D., Ganesan A., Daegelen P., Sghir A. et al.

J. Bacteriol. 190:2572-2579(2008) · UniProtKB (1,813)

The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla.

Jaillon O., Aury J.-M., Noel B., Policriti A., Clepet C., Casagrande A., Choisne N., Aubourg S., Vitulo N., Jubin C. et al.

Nature 449:463-467(2007) · UniProtKB (30,273)

Exploring nervous system transcriptomes during embryogenesis and metamorphosis in Xenopus tropicalis using EST analysis.

Fierro A.C., Thuret R., Coen L., Perron M., Demeneix B., Wegnez M., Gyapay G., Weissenbach J., Wincker P., Mazabraud A. et al.

BMC Genomics 8:118-118(2007) · UniProtKB (1)

Extending the Bacillus cereus group genomics to putative food-borne pathogens of different toxicity.

Lapidus A., Goltsman E., Auger S., Galleron N., Segurens B., Dossat C., Land M.L., Broussolle V., Brillard J., Guinebretiere M.-H. et al.

Chem. Biol. Interact. 171:236-249(2008) · UniProtKB (9,490)

A tale of two oxidation states: bacterial colonization of arsenic-rich environments.

Muller D., Medigue C., Koechler S., Barbe V., Barakat M., Talla E., Bonnefoy V., Krin E., Arsene-Ploetze F., Carapito C. et al.

PLoS Genet. 3:518-530(2007) · UniProtKB (3,274)

Identification of the last unknown genes in the fermentation pathway of lysine.

Kreimeyer A., Perret A., Lechaplais C., Vallenet D., Medigue C., Salanoubat M., Weissenbach J.

J. Biol. Chem. 282:7191-7197(2007) · UniProtKB (3)

Global trends of whole-genome duplications revealed by the ciliate Paramecium tetraurelia.

Aury J.-M., Jaillon O., Duret L., Noel B., Jubin C., Porcel B.M., Segurens B., Daubin V., Anthouard V., Aiach N. et al.

Nature 444:171-178(2006) · UniProtKB (39,350)

The Xist RNA gene evolved in eutherians by pseudogenization of a protein-coding gene.

Duret L., Chureau C., Samain S., Weissenbach J., Avner P.

Science 312:1653-1655(2006) · UniProtKB (3)

The complete genome sequence of Lactobacillus bulgaricus reveals extensive and ongoing reductive evolution.

van de Guchte M., Penaud S., Grimaldi C., Barbe V., Bryson K., Nicolas P., Robert C., Oztas S., Mangenot S., Couloux A. et al.

Proc. Natl. Acad. Sci. U.S.A. 103:9274-9279(2006) · UniProtKB (1,519)

Complete genome sequence of the entomopathogenic and metabolically versatile soil bacterium Pseudomonas entomophila.

Vodovar N., Vallenet D., Cruveiller S., Rouy Z., Barbe V., Acosta C., Cattolico L., Jubin C., Lajus A., Segurens B. et al.

Nat. Biotechnol. 24:673-679(2006) · UniProtKB (5,126)

Deciphering the evolution and metabolism of an anammox bacterium from a community genome.

Strous M., Pelletier E., Mangenot S., Rattei T., Lehner A., Taylor M.W., Horn M., Daims H., Bartol-Mavel D., Wincker P. et al.

Nature 440:790-794(2006) · UniProtKB (4,495)

Vertebrate-type intron-rich genes in the marine annelid Platynereis dumerilii.

Raible F., Tessmar-Raible K., Osoegawa K., Wincker P., Jubin C., Balavoine G., Ferrier D., Benes V., de Jong P., Weissenbach J. et al.

Science 310:1325-1326(2005) · UniProtKB (31)

Phenotypic spectrum of CHARGE syndrome in fetuses with CHD7 truncating mutations correlates with expression during human development.

Sanlaville D., Etchevers H.C., Gonzales M., Martinovic J., Clement-Ziza M., Delezoide A.L., Aubry M.C., Pelet A., Chemouny S., Cruaud C. et al.

J. Med. Genet. 43:211-217(2006) · Mapped (3)

Comparative analysis of BAC and whole genome shotgun sequences from an Anopheles gambiae region related to Plasmodium encapsulation.

Eiglmeier K., Wincker P., Cattolico L., Anthouard V., Holm I., Eckenberg R., Quesneville H., Jaillon O., Collins F.H., Weissenbach J. et al.

Insect Biochem. Mol. Biol. 35:799-814(2005) · UniProtKB (25)

Remodelling of the homeobox gene complement in the tunicate Oikopleura dioica.

Edvardsen R.B., Seo H.C., Jensen M.F., Mialon A., Mikhaleva J., Bjordal M., Cartry J., Reinhardt R., Weissenbach J., Wincker P. et al.

Curr. Biol. 15:R12-3(2005) · UniProtKB (296)

Early onset autosomal dominant spastic paraplegia caused by novel mutations in SPG3A.

Abel A., Fonknechten N., Hofer A., Durr A., Cruaud C., Voit T., Weissenbach J., Brice A., Klimpe S., Auburger G. et al.

Neurogenetics 5:239-243(2004) · Mapped (5)

Unique features revealed by the genome sequence of Acinetobacter sp. ADP1, a versatile and naturally transformation competent bacterium.

Barbe V., Vallenet D., Fonknechten N., Kreimeyer A., Oztas S., Labarre L., Cruveiller S., Robert C., Duprat S., Wincker P. et al.

Nucleic Acids Res. 32:5766-5779(2004) · UniProtKB (3,293)

Genome duplication in the teleost fish Tetraodon nigroviridis reveals the early vertebrate proto-karyotype.

Jaillon O., Aury J.-M., Brunet F., Petit J.-L., Stange-Thomann N., Mauceli E., Bouneau L., Fischer C., Ozouf-Costaz C., Bernot A. et al.

Nature 431:946-957(2004) · UniProtKB (27,873)

Hox cluster disintegration with persistent anteroposterior order of expression in Oikopleura dioica.

Seo H.C., Edvardsen R.B., Maeland A.D., Bjordal M., Jensen M.F., Hansen A., Flaat M., Weissenbach J., Lehrach H., Wincker P. et al.

Nature 431:67-71(2004) · UniProtKB (223)

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