1 - 25 of 30 results for author:"Sodergren E." in Literature citations
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| Revised sequence and annotation of the Rhodobacter sphaeroides 2.4.1 genome. Kontur W.S., Schackwitz W.S., Ivanova N., Martin J., Labutti K., Deshpande S., Tice H.N., Pennacchio C., Sodergren E., Weinstock G.M. et al. J. Bacteriol. 194:7016-7017(2012) · UniProtKB (1) |
| Complete genome sequence of Enterococcus faecium strain TX16 and comparative genomic analysis of Enterococcus faecium genomes. Qin X., Galloway-Pena J.R., Sillanpaa J., Roh J.H., Nallapareddy S.R., Chowdhury S., Bourgogne A., Choudhury T., Muzny D.M., Buhay C.J. et al. BMC Microbiol. 12:135-135(2012) · UniProtKB (3,058) |
| Inflammatory bowel diseases phenotype, C. difficile and NOD2 genotype are associated with shifts in human ileum associated microbial composition. Li E., Hamm C.M., Gulati A.S., Sartor R.B., Chen H., Wu X., Zhang T., Rohlf F.J., Zhu W., Gu C. et al. PLoS ONE 7:e26284-e26284(2012) · Mapped (8) |
| Whole genome sequences of three Treponema pallidum ssp. pertenue strains: yaws and syphilis treponemes differ in less than 0.2% of the genome sequence. Cejkova D., Zobanikova M., Chen L., Pospisilova P., Strouhal M., Qin X., Mikalova L., Norris S.J., Muzny D.M., Gibbs R.A. et al. PLoS Negl Trop Dis 6:e1471-e1471(2012) · UniProtKB (4,253) |
| Phosphate transporters in marine phytoplankton and their viruses: cross-domain commonalities in viral-host gene exchanges. Monier A., Welsh R.M., Gentemann C., Weinstock G., Sodergren E., Armbrust E.V., Eisen J.A., Worden A.Z. Environ. Microbiol. 14:162-176(2012) · UniProtKB (3) |
| A dominant mutation in RPE65 identified by whole-exome sequencing causes retinitis pigmentosa with choroidal involvement. Bowne S.J., Humphries M.M., Sullivan L.S., Kenna P.F., Tam L.C., Kiang A.S., Campbell M., Weinstock G.M., Koboldt D.C., Ding L. et al. Eur. J. Hum. Genet. 19:1074-1081(2011) · UniProtKB (1) · Mapped (2) |
| Genome analysis of Treponema pallidum subsp. pallidum and subsp. pertenue strains: most of the genetic differences are localized in six regions. Mikalova L., Strouhal M., Cejkova D., Zobanikova M., Pospisilova P., Norris S.J., Sodergren E., Weinstock G.M., Smajs D. PLoS ONE 5:e15713-e15713(2010) · UniProtKB (249) |
| A catalog of reference genomes from the human microbiome. Nelson K.E., Weinstock G.M., Highlander S.K., Worley K.C., Creasy H.H., Wortman J.R., Rusch D.B., Mitreva M., Sodergren E., Chinwalla A.T. et al. Science 328:994-999(2010) · UniProtKB (2,264) |
| Enteric defensins are essential regulators of intestinal microbial ecology. Salzman N.H., Hung K., Haribhai D., Chu H., Karlsson-Sjoberg J., Amir E., Teggatz P., Barman M., Hayward M., Eastwood D. et al. Nat. Immunol. 11:76-83(2010) · Mapped (6) |
| Complete genome sequence of Treponema pallidum ssp. pallidum strain SS14 determined with oligonucleotide arrays. Matejkova P., Strouhal M., Smajs D., Norris S.J., Palzkill T., Petrosino J.F., Sodergren E., Norton J.E., Singh J., Richmond T.A. et al. BMC Microbiol. 8:76-76(2008) · UniProtKB (1,028) |
| The genome of the model beetle and pest Tribolium castaneum. Tribolium Genome Sequencing Consortium Nature 452:949-955(2008) · UniProtKB (16,490) |
| Genome differences between Treponema pallidum subsp. pallidum strain Nichols and T. paraluiscuniculi strain Cuniculi A. Strouhal M., Smajs D., Matejkova P., Sodergren E., Amin A.G., Howell J.K., Norris S.J., Weinstock G.M. Infect. Immun. 75:5859-5866(2007) · UniProtKB (56) |
| Evolutionary and biomedical insights from the rhesus macaque genome. Gibbs R.A., Rogers J., Katze M.G., Bumgarner R., Weinstock G.M., Mardis E.R., Remington K.A., Strausberg R.L., Venter J.C., Wilson R.K. et al. Science 316:222-234(2007) · UniProtKB (35,178) |
| The genome sequence of Mannheimia haemolytica A1: insights into virulence, natural competence, and Pasteurellaceae phylogeny. Gioia J., Qin X., Jiang H., Clinkenbeard K., Lo R., Liu Y., Fox G.E., Yerrapragada S., McLeod M.P., McNeill T.Z. et al. J. Bacteriol. 188:7257-7266(2006) · UniProtKB (2,690) |
| The DNA sequence, annotation and analysis of human chromosome 3. Muzny D.M., Scherer S.E., Kaul R., Wang J., Yu J., Sudbrak R., Buhay C.J., Chen R., Cree A., Ding Y. et al. Nature 440:1194-1198(2006) · UniProtKB (3,643) |
| Comparative analysis of the bovine MHC class IIb sequence identifies inversion breakpoints and three unexpected genes. Childers C.P., Newkirk H.L., Honeycutt D.A., Ramlachan N., Muzney D.M., Sodergren E., Gibbs R.A., Weinstock G.M., Womack J.E., Skow L.C. Anim. Genet. 37:121-129(2006) · UniProtKB (19) |
| The finished DNA sequence of human chromosome 12. Scherer S.E., Muzny D.M., Buhay C.J., Chen R., Cree A., Ding Y., Dugan-Rocha S., Gill R., Gunaratne P., Harris R.A. et al. Nature 440:346-351(2006) · UniProtKB (4,043) |
| The genome of the social amoeba Dictyostelium discoideum. Eichinger L., Pachebat J.A., Gloeckner G., Rajandream M.A., Sucgang R., Berriman M., Song J., Olsen R., Szafranski K., Xu Q. et al. Nature 435:43-57(2005) · UniProtKB (12,702) |
| The DNA sequence of the human X chromosome. Ross M.T., Grafham D.V., Coffey A.J., Scherer S., McLay K., Muzny D., Platzer M., Howell G.R., Burrows C., Bird C.P. et al. Nature 434:325-337(2005) · UniProtKB (1,805) |
| Comparative genome sequencing of Drosophila pseudoobscura: chromosomal, gene, and cis-element evolution. Richards S., Liu Y., Bettencourt B.R., Hradecky P., Letovsky S., Nielsen R., Thornton K., Hubisz M.J., Chen R., Meisel R.P. et al. Genome Res. 15:1-18(2005) · UniProtKB (16,513) |
| Complete genome sequence of Rickettsia typhi and comparison with sequences of other Rickettsiae. McLeod M.P., Qin X., Karpathy S.E., Gioia J., Highlander S.K., Fox G.E., McNeill T.Z., Jiang H., Muzny D., Jacob L.S. et al. J. Bacteriol. 186:5842-5855(2004) · UniProtKB (836) |
| Comparison of the genome of the oral pathogen Treponema denticola with other spirochete genomes. Seshadri R., Myers G.S.A., Tettelin H., Eisen J.A., Heidelberg J.F., Dodson R.J., Davidsen T.M., DeBoy R.T., Fouts D.E., Haft D.H. et al. Proc. Natl. Acad. Sci. U.S.A. 101:5646-5651(2004) · UniProtKB (2,753) |
| Genome sequence of the Brown Norway rat yields insights into mammalian evolution. Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E. et al. |
| Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence. Celniker S.E., Wheeler D.A., Kronmiller B., Carlson J.W., Halpern A., Patel S., Adams M., Champe M., Dugan S.P., Frise E. et al. Genome Biol. 3:RESEARCH0079-RESEARCH0079(2002) · UniProtKB (1,438) · Mapped (16) |
| Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F. et al. Proc. Natl. Acad. Sci. U.S.A. 99:16899-16903(2002) · UniProtKB (495) · Mapped (5,595) |