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1 - 25 of 70 results for author:"Paulsen I.T." in Literature citations

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Comparative genomics of plant-associated Pseudomonas spp.: insights into diversity and inheritance of traits involved in multitrophic interactions.

Loper J.E., Hassan K.A., Mavrodi D.V., Davis E.W., Lim C.K., Shaffer B.T., Elbourne L.D., Stockwell V.O., Hartney S.L., Breakwell K. et al.

PLoS Genet. 8:e1002784-e1002784(2012) · UniProtKB (39,434)

pJIE137 carrying blaCTX-M-62 is closely related to p271A carrying blaNDM-1.

Partridge S.R., Paulsen I.T., Iredell J.R.

Antimicrob. Agents Chemother. 56:2166-2168(2012) · UniProtKB (70)

Comparative genomic analysis of the thermophilic biomass-degrading fungi Myceliophthora thermophila and Thielavia terrestris.

Berka R.M., Grigoriev I.V., Otillar R., Salamov A., Grimwood J., Reid I., Ishmael N., John T., Darmond C., Moisan M.-C. et al.

Nat. Biotechnol. 29:922-927(2011) · UniProtKB (18,841)

Genome of alkaliphilic Bacillus pseudofirmus OF4 reveals adaptations that support the ability to grow in an external pH range from 7.5 to 11.4.

Janto B., Ahmed A., Ito M., Liu J., Hicks D.B., Pagni S., Fackelmayer O.J., Smith T.A., Earl J., Elbourne L.D. et al.

Environ. Microbiol. 13:3289-3309(2011) · UniProtKB (4,310)

Complete sequence of pJIE143, a pir-type plasmid carrying ISEcp1-blaCTX-M-15 from an Escherichia coli ST131 isolate.

Partridge S.R., Ellem J.A., Tetu S.G., Zong Z., Paulsen I.T., Iredell J.R.

Antimicrob. Agents Chemother. 55:5933-5935(2011) · UniProtKB (41)

Crystal structure of an integron gene cassette-associated protein from Vibrio cholerae identifies a cationic drug-binding module.

Deshpande C.N., Harrop S.J., Boucher Y., Hassan K.A., Di Leo R., Xu X., Cui H., Savchenko A., Chang C., Labbate M. et al.

PLoS ONE 6:e16934-e16934(2011) · UniProtKB (1)

Niche of harmful alga Aureococcus anophagefferens revealed through ecogenomics.

Gobler C.J., Berry D.L., Dyhrman S.T., Wilhelm S.W., Salamov A., Lobanov A.V., Zhang Y., Collier J.L., Wurch L.L., Kustka A.B. et al.

Proc. Natl. Acad. Sci. U.S.A. 108:4352-4357(2011) · UniProtKB (11,396)

Structural and functional analysis of the type III secretion system from Pseudomonas fluorescens Q8r1-96.

Mavrodi D.V., Joe A., Mavrodi O.V., Hassan K.A., Weller D.M., Paulsen I.T., Loper J.E., Alfano J.R., Thomashow L.S.

J. Bacteriol. 193:177-189(2011) · UniProtKB (49)

Complete genome sequence of the multiresistant taxonomic outlier Pseudomonas aeruginosa PA7.

Roy P.H., Tetu S.G., Larouche A., Elbourne L., Tremblay S., Ren Q., Dodson R., Harkins D., Shay R., Watkins K. et al.

PLoS ONE 5:e8842-e8842(2010) · UniProtKB (35)

Mobile genetic elements in the genome of the beneficial rhizobacterium Pseudomonas fluorescens Pf-5.

Mavrodi D.V., Loper J.E., Paulsen I.T., Thomashow L.S.

BMC Microbiol. 9:8-8(2009) · UniProtKB (30)

Genome of the epsilonproteobacterial chemolithoautotroph Sulfurimonas denitrificans.

Sievert S.M., Scott K.M., Klotz M.G., Chain P.S.G., Hauser L.J., Hemp J., Huegler M., Land M., Lapidus A., Larimer F.W. et al.

Appl. Environ. Microbiol. 74:1145-1156(2008) · UniProtKB (2,084)

Genome sequence of Babesia bovis and comparative analysis of apicomplexan hemoprotozoa.

Brayton K.A., Lau A.O.T., Herndon D.R., Hannick L., Kappmeyer L.S., Berens S.J., Bidwell S.L., Brown W.C., Crabtree J., Fadrosh D. et al.

PLoS Pathog. 3:1401-1413(2007) · UniProtKB (3,690)

The Chlamydomonas genome reveals the evolution of key animal and plant functions.

Merchant S.S., Prochnik S.E., Vallon O., Harris E.H., Karpowicz S.J., Witman G.B., Terry A., Salamov A., Fritz-Laylin L.K., Marechal-Drouard L. et al.

Science 318:245-250(2007) · UniProtKB (14,261) · Mapped (74)

Genome sequence of Aedes aegypti, a major arbovirus vector.

Nene V., Wortman J.R., Lawson D., Haas B.J., Kodira C.D., Tu Z.J., Loftus B.J., Xi Z., Megy K., Grabherr M. et al.

Science 316:1718-1723(2007) · UniProtKB (16,646)

Genome sequence and identification of candidate vaccine antigens from the animal pathogen Dichelobacter nodosus.

Myers G.S.A., Parker D., Al-Hasani K., Kennan R.M., Seemann T., Ren Q., Badger J.H., Selengut J.D., Deboy R.T., Tettelin H. et al.

Nat. Biotechnol. 25:569-575(2007) · UniProtKB (1,273)

The genome of deep-sea vent chemolithoautotroph Thiomicrospira crunogena XCL-2.

Scott K.M., Sievert S.M., Abril F.N., Ball L.A., Barrett C.J., Blake R.A., Boller A.J., Chain P.S.G., Clark J.A., Davis C.R. et al.

PLoS Biol. 4:1-17(2006) · UniProtKB (2,187)

Comparative genomic evidence for a close relationship between the dimorphic prosthecate bacteria Hyphomonas neptunium and Caulobacter crescentus.

Badger J.H., Hoover T.R., Brun Y.V., Weiner R.M., Laub M.T., Alexandre G., Mrazek J., Ren Q., Paulsen I.T., Nelson K.E. et al.

J. Bacteriol. 188:6841-6850(2006) · UniProtKB (3,499)

Genome sequence of Synechococcus CC9311: insights into adaptation to a coastal environment.

Palenik B., Ren Q., Dupont C.L., Myers G.S., Heidelberg J.F., Badger J.H., Madupu R., Nelson W.C., Brinkac L.M., Dodson R.J. et al.

Proc. Natl. Acad. Sci. U.S.A. 103:13555-13559(2006) · UniProtKB (2,882)

Skewed genomic variability in strains of the toxigenic bacterial pathogen, Clostridium perfringens.

Myers G.S.A., Rasko D.A., Cheung J.K., Ravel J., Seshadri R., DeBoy R.T., Ren Q., Varga J., Awad M.M., Brinkac L.M. et al.

Genome Res. 16:1031-1040(2006) · UniProtKB (5,484)

Genome sequence of Theileria parva, a bovine pathogen that transforms lymphocytes.

Gardner M.J., Bishop R., Shah T., de Villiers E.P., Carlton J.M., Hall N., Ren Q., Paulsen I.T., Pain A., Berriman M. et al.

Science 309:134-137(2005) · UniProtKB (4,068)

Complete genome sequence of the plant commensal Pseudomonas fluorescens Pf-5.

Paulsen I.T., Press C.M., Ravel J., Kobayashi D.Y., Myers G.S.A., Mavrodi D.V., DeBoy R.T., Seshadri R., Ren Q., Madupu R. et al.

Nat. Biotechnol. 23:873-878(2005) · UniProtKB (6,108)

Insights on evolution of virulence and resistance from the complete genome analysis of an early methicillin-resistant Staphylococcus aureus strain and a biofilm-producing methicillin-resistant Staphylococcus epidermidis strain.

Gill S.R., Fouts D.E., Archer G.L., Mongodin E.F., DeBoy R.T., Ravel J., Paulsen I.T., Kolonay J.F., Brinkac L.M., Beanan M.J. et al.

J. Bacteriol. 187:2426-2438(2005) · UniProtKB (5,172)

Genome sequence of Silicibacter pomeroyi reveals adaptations to the marine environment.

Moran M.A., Buchan A., Gonzalez J.M., Heidelberg J.F., Whitman W.B., Kiene R.P., Henriksen J.R., King G.M., Belas R., Fuqua C. et al.

Nature 432:910-913(2004) · UniProtKB (4,242)

Identification of a Dichelobacter nodosus ferric uptake regulator and determination of its regulatory targets.

Parker D., Kennan R.M., Myers G.S., Paulsen I.T., Rood J.I.

J. Bacteriol. 187:366-375(2005) · UniProtKB (5)

Genomic insights into methanotrophy: the complete genome sequence of Methylococcus capsulatus (Bath).

Ward N.L., Larsen O., Sakwa J., Bruseth L., Khouri H.M., Durkin A.S., Dimitrov G., Jiang L., Scanlan D., Kang K.H. et al.

PLoS Biol. 2:1616-1628(2004) · UniProtKB (2,925)

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