25
results
for author:"Kolonay J.F."
in Literature Citations
| Life in hot carbon monoxide: the complete genome sequence of Carboxydothermus hydrogenoformans Z-2901. Wu M., Ren Q., Durkin A.S., Daugherty S.C., Brinkac L.M., Dodson R.J., Madupu R., Sullivan S.A., Kolonay J.F., Nelson W.C. et al. PLoS Genet. 1:563-574(2005) · UniProtKB (2,615) |
| The psychrophilic lifestyle as revealed by the genome sequence of Colwellia psychrerythraea 34H through genomic and proteomic analyses. Methe B.A., Nelson K.E., Deming J.W., Momen B., Melamud E., Zhang X., Moult J., Madupu R., Nelson W.C., Dodson R.J. et al. Proc. Natl. Acad. Sci. U.S.A. 102:10913-10918(2005) · UniProtKB (4,872) |
| Insights on evolution of virulence and resistance from the complete genome analysis of an early methicillin-resistant Staphylococcus aureus strain and a biofilm-producing methicillin-resistant Staphylococcus epidermidis strain. Gill S.R., Fouts D.E., Archer G.L., Mongodin E.F., DeBoy R.T., Ravel J., Paulsen I.T., Kolonay J.F., Brinkac L.M., Beanan M.J. et al. J. Bacteriol. 187:2426-2438(2005) · UniProtKB (5,172) |
| Genome sequence of the PCE-dechlorinating bacterium Dehalococcoides ethenogenes. Seshadri R., Adrian L., Fouts D.E., Eisen J.A., Phillippy A.M., Methe B.A., Ward N.L., Nelson W.C., DeBoy R.T., Khouri H.M. et al. Science 307:105-108(2005) · UniProtKB (1,502) |
| Structural flexibility in the Burkholderia mallei genome. Nierman W.C., DeShazer D., Kim H.S., Tettelin H., Nelson K.E., Feldblyum T.V., Ulrich R.L., Ronning C.M., Brinkac L.M., Daugherty S.C. et al. Proc. Natl. Acad. Sci. U.S.A. 101:14246-14251(2004) · UniProtKB (4,797) |
| Whole genome comparisons of serotype 4b and 1/2a strains of the food-borne pathogen Listeria monocytogenes reveal new insights into the core genome components of this species. Nelson K.E., Fouts D.E., Mongodin E.F., Ravel J., DeBoy R.T., Kolonay J.F., Rasko D.A., Angiuoli S.V., Gill S.R., Paulsen I.T. et al. Nucleic Acids Res. 32:2386-2395(2004) · UniProtKB (8,897) |
| The genome sequence of the anaerobic, sulfate-reducing bacterium Desulfovibrio vulgaris Hildenborough. Heidelberg J.F., Seshadri R., Haveman S.A., Hemme C.L., Paulsen I.T., Kolonay J.F., Eisen J.A., Ward N.L., Methe B.A., Brinkac L.M. et al. Nat. Biotechnol. 22:554-559(2004) · UniProtKB (3,517) |
| Comparison of the genome of the oral pathogen Treponema denticola with other spirochete genomes. Seshadri R., Myers G.S.A., Tettelin H., Eisen J.A., Heidelberg J.F., Dodson R.J., Davidsen T.M., DeBoy R.T., Fouts D.E., Haft D.H. et al. Proc. Natl. Acad. Sci. U.S.A. 101:5646-5651(2004) · UniProtKB (2,753) |
| Phylogenomics of the reproductive parasite Wolbachia pipientis wMel: a streamlined genome overrun by mobile genetic elements. Wu M., Sun L.V., Vamathevan J.J., Riegler M., DeBoy R.T., Brownlie J.C., McGraw E.A., Martin W., Esser C., Ahmadinejad N. et al. PLoS Biol. 2:327-341(2004) · UniProtKB (1,161) |
| The genome sequence of Bacillus cereus ATCC 10987 reveals metabolic adaptations and a large plasmid related to Bacillus anthracis pXO1. Rasko D.A., Ravel J., Oekstad O.A., Helgason E., Cer R.Z., Jiang L., Shores K.A., Fouts D.E., Tourasse N.J., Angiuoli S.V. et al. Nucleic Acids Res. 32:977-988(2004) · UniProtKB (5,821) |
| Genome of Geobacter sulfurreducens: metal reduction in subsurface environments. Methe B.A., Nelson K.E., Eisen J.A., Paulsen I.T., Nelson W.C., Heidelberg J.F., Wu D., Wu M., Ward N.L., Beanan M.J. et al. Science 302:1967-1969(2003) · UniProtKB (3,415) |
| Genetic analysis of a high-level vancomycin-resistant isolate of Staphylococcus aureus. Weigel L.M., Clewell D.B., Gill S.R., Clark N.C., McDougal L.K., Flannagan S.E., Kolonay J.F., Shetty J., Killgore G.E., Tenover F.C. Science 302:1569-1571(2003) · UniProtKB (57) |
| Complete genome sequence of the oral pathogenic bacterium Porphyromonas gingivalis strain W83. Nelson K.E., Fleischmann R.D., DeBoy R.T., Paulsen I.T., Fouts D.E., Eisen J.A., Daugherty S.C., Dodson R.J., Durkin A.S., Gwinn M.L. et al. J. Bacteriol. 185:5591-5601(2003) · UniProtKB (1,863) |
| The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000. Buell C.R., Joardar V., Lindeberg M., Selengut J., Paulsen I.T., Gwinn M.L., Dodson R.J., DeBoy R.T., Durkin A.S., Kolonay J.F. et al. Proc. Natl. Acad. Sci. U.S.A. 100:10181-10186(2003) · UniProtKB (5,425) |
| The genome sequence of Bacillus anthracis Ames and comparison to closely related bacteria. Read T.D., Peterson S.N., Tourasse N.J., Baillie L.W., Paulsen I.T., Nelson K.E., Tettelin H., Fouts D.E., Eisen J.A., Gill S.R. et al. Nature 423:81-86(2003) · UniProtKB (5,313) |
| Role of mobile DNA in the evolution of vancomycin-resistant Enterococcus faecalis. Paulsen I.T., Banerjei L., Myers G.S.A., Nelson K.E., Seshadri R., Read T.D., Fouts D.E., Eisen J.A., Gill S.R., Heidelberg J.F. et al. Science 299:2071-2074(2003) · UniProtKB (3,240) |
| Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440. Nelson K.E., Weinel C., Paulsen I.T., Dodson R.J., Hilbert H., Martins dos Santos V.A.P., Fouts D.E., Gill S.R., Pop M., Holmes M. et al. Environ. Microbiol. 4:799-808(2002) · UniProtKB (5,313) |
| Genome sequence of the dissimilatory metal ion-reducing bacterium Shewanella oneidensis. Heidelberg J.F., Paulsen I.T., Nelson K.E., Gaidos E.J., Nelson W.C., Read T.D., Eisen J.A., Seshadri R., Ward N.L., Methe B.A. et al. Nat. Biotechnol. 20:1118-1123(2002) · UniProtKB (4,586) |
| The Brucella suis genome reveals fundamental similarities between animal and plant pathogens and symbionts. Paulsen I.T., Seshadri R., Nelson K.E., Eisen J.A., Heidelberg J.F., Read T.D., Dodson R.J., Umayam L.A., Brinkac L.M., Beanan M.J. et al. Proc. Natl. Acad. Sci. U.S.A. 99:13148-13153(2002) · UniProtKB (3,256) |
| Whole-genome comparison of Mycobacterium tuberculosis clinical and laboratory strains. Fleischmann R.D., Alland D., Eisen J.A., Carpenter L., White O., Peterson J.D., DeBoy R.T., Dodson R.J., Gwinn M.L., Haft D.H. et al. J. Bacteriol. 184:5479-5490(2002) · UniProtKB (4,198) |
| Complete genome sequence and comparative genomic analysis of an emerging human pathogen, serotype V Streptococcus agalactiae. Tettelin H., Masignani V., Cieslewicz M.J., Eisen J.A., Peterson S.N., Wessels M.R., Paulsen I.T., Nelson K.E., Margarit I., Read T.D. et al. Proc. Natl. Acad. Sci. U.S.A. 99:12391-12396(2002) · UniProtKB (2,105) |
| The complete genome sequence of Chlorobium tepidum TLS, a photosynthetic, anaerobic, green-sulfur bacterium. Eisen J.A., Nelson K.E., Paulsen I.T., Heidelberg J.F., Wu M., Dodson R.J., DeBoy R.T., Gwinn M.L., Nelson W.C., Haft D.H. et al. Proc. Natl. Acad. Sci. U.S.A. 99:9509-9514(2002) · UniProtKB (2,250) |
| Complete genome sequence of a virulent isolate of Streptococcus pneumoniae. Tettelin H., Nelson K.E., Paulsen I.T., Eisen J.A., Read T.D., Peterson S.N., Heidelberg J.F., DeBoy R.T., Haft D.H., Dodson R.J. et al. Science 293:498-506(2001) · UniProtKB (2,109) |
| Complete genome sequence of Caulobacter crescentus. Nierman W.C., Feldblyum T.V., Laub M.T., Paulsen I.T., Nelson K.E., Eisen J.A., Heidelberg J.F., Alley M.R.K., Ohta N., Maddock J.R. et al. Proc. Natl. Acad. Sci. U.S.A. 98:4136-4141(2001) · UniProtKB (3,718) |
| Genome sequences of Chlamydia trachomatis MoPn and Chlamydia pneumoniae AR39. Read T.D., Brunham R.C., Shen C., Gill S.R., Heidelberg J.F., White O., Hickey E.K., Peterson J.D., Utterback T.R., Berry K.J. et al. Nucleic Acids Res. 28:1397-1406(2000) · UniProtKB (2,031) |
