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Latrophilin signaling links anterior-posterior tissue polarity and oriented cell divisions in the C. elegans embryo.

Langenhan T., Promel S., Mestek L., Esmaeili B., Waller-Evans H., Hennig C., Kohara Y., Avery L., Vakonakis I., Schnabel R. et al.

Dev. Cell 17:494-504(2009) · Mapped (7)

Polycystic kidney disease in the medaka (Oryzias latipes) pc mutant caused by a mutation in the Gli-Similar3 (glis3) gene.

Hashimoto H., Miyamoto R., Watanabe N., Shiba D., Ozato K., Inoue C., Kubo Y., Koga A., Jindo T., Narita T. et al.

PLoS ONE 4:e6299-e6299(2009) · UniProtKB (5)

C. elegans mig-6 encodes papilin isoforms that affect distinct aspects of DTC migration, and interacts genetically with mig-17 and collagen IV.

Kawano T., Zheng H., Merz D.C., Kohara Y., Tamai K.K., Nishiwaki K., Culotti J.G.

Development 136:1433-1442(2009) · UniProtKB (1) · Mapped (4)

ELT-2 is the predominant transcription factor controlling differentiation and function of the C. elegans intestine, from embryo to adult.

McGhee J.D., Fukushige T., Krause M.W., Minnema S.E., Goszczynski B., Gaudet J., Kohara Y., Bossinger O., Zhao Y., Khattra J. et al.

Dev. Biol. 327:551-565(2009) · Mapped (1)

The amphioxus genome and the evolution of the chordate karyotype.

Putnam N.H., Butts T., Ferrier D.E.K., Furlong R.F., Hellsten U., Kawashima T., Robinson-Rechavi M., Shoguchi E., Terry A., Yu J.-K. et al.

Nature 453:1064-1071(2008) · UniProtKB (28,535)

Effect of Bcl11b genotypes and gamma-radiation on the development of mouse thymic lymphomas.

Yoshikai Y., Sato T., Morita S., Kohara Y., Takagi R., Mishima Y., Kominami R.

Biochem. Biophys. Res. Commun. 373:282-285(2008) · Mapped (12)

Endogenous siRNAs from naturally formed dsRNAs regulate transcripts in mouse oocytes.

Watanabe T., Totoki Y., Toyoda A., Kaneda M., Kuramochi-Miyagawa S., Obata Y., Chiba H., Kohara Y., Kono T., Nakano T. et al.

Nature 453:539-543(2008) · UniProtKB (1) · Mapped (6)

The physcomitrella genome reveals evolutionary insights into the conquest of land by plants.

Rensing S.A., Lang D., Zimmer A.D., Terry A., Salamov A., Shapiro H., Nishiyama T., Perroud P.-F., Lindquist E.A., Kamisugi Y. et al.

Science 319:64-69(2008) · UniProtKB (34,711)

The C. elegans CBFbeta homologue BRO-1 interacts with the Runx factor, RNT-1, to promote stem cell proliferation and self-renewal.

Kagoshima H., Nimmo R., Saad N., Tanaka J., Miwa Y., Mitani S., Kohara Y., Woollard A.

Development 134:3905-3915(2007) · Mapped (3)

Role of the Dnmt3 family in de novo methylation of imprinted and repetitive sequences during male germ cell development in the mouse.

Kato Y., Kaneda M., Hata K., Kumaki K., Hisano M., Kohara Y., Okano M., Li E., Nozaki M., Sasaki H.

Hum. Mol. Genet. 16:2272-2280(2007) · Mapped (6)

The medaka draft genome and insights into vertebrate genome evolution.

Kasahara M., Naruse K., Sasaki S., Nakatani Y., Qu W., Ahsan B., Yamada T., Nagayasu Y., Doi K., Kasai Y. et al.

Nature 447:714-719(2007) · UniProtKB (1)

Analysis of large scale expression sequenced tags (ESTs) from the anural ascidian, Molgula tectiformis.

Gyoja F., Satou Y., Shin-i T., Kohara Y., Swalla B.J., Satoh N.

Dev. Biol. 307:460-482(2007) · UniProtKB (24)

Retrotransposon silencing by DNA methylation can drive mammalian genomic imprinting.

Suzuki S., Ono R., Narita T., Pask A.J., Shaw G., Wang C., Kohda T., Alsop A.E., Marshall Graves J.A., Kohara Y. et al.

PLoS Genet. 3:e55-e55(2007) · UniProtKB (1)

RUNX regulates stem cell proliferation and differentiation: insights from studies of C. elegans.

Kagoshima H., Shigesada K., Kohara Y.

J. Cell. Biochem. 100:1119-1130(2007) · Mapped (1)

Mtf-1 lymphoma-susceptibility locus affects retention of large thymocytes with high ROS levels in mice after gamma-irradiation.

Maruyama M., Yamamoto T., Kohara Y., Katsuragi Y., Mishima Y., Aoyagi Y., Kominami R.

Biochem. Biophys. Res. Commun. 354:209-215(2007) · Mapped (9)

The ELT-2 GATA-factor and the global regulation of transcription in the C. elegans intestine.

McGhee J.D., Sleumer M.C., Bilenky M., Wong K., McKay S.J., Goszczynski B., Tian H., Krich N.D., Khattra J., Holt R.A. et al.

Dev. Biol. 302:627-645(2007) · Mapped (46)

Organization and structure of hox gene loci in medaka genome and comparison with those of pufferfish and zebrafish genomes.

Kurosawa G., Takamatsu N., Takahashi M., Sumitomo M., Sanaka E., Yamada K., Nishii K., Matsuda M., Asakawa S., Ishiguro H. et al.

Gene 370:75-82(2006) · UniProtKB (40)

nfi-I affects behavior and life-span in C. elegans but is not essential for DNA replication or survival.

Lazakovitch E., Kalb J.M., Matsumoto R., Hirono K., Kohara Y., Gronostajski R.M.

BMC Dev. Biol. 5:24-24(2005) · Mapped (6)

The C. elegans RUNX transcription factor RNT-1/MAB-2 is required for asymmetrical cell division of the T blast cell.

Kagoshima H., Sawa H., Mitani S., Burglin T.R., Shigesada K., Kohara Y.

Dev. Biol. 287:262-273(2005) · Mapped (7)

The genome of the social amoeba Dictyostelium discoideum.

Eichinger L., Pachebat J.A., Gloeckner G., Rajandream M.A., Sucgang R., Berriman M., Song J., Olsen R., Szafranski K., Xu Q. et al.

Nature 435:43-57(2005) · UniProtKB (12,911)

cimp1, a novel astacin family metalloproteinase gene from East African cichlids, is differentially expressed between species during growth.

Kijimoto T., Watanabe M., Fujimura K., Nakazawa M., Murakami Y., Kuratani S., Kohara Y., Gojobori T., Okada N.

Mol. Biol. Evol. 22:1649-1660(2005) · UniProtKB (1)

Comparative sequence analysis of a gene-dense region among closely related species of Drosophila melanogaster.

Kawahara Y., Matsuo T., Nozawa M., Shin-I T., Kohara Y., Aigaki T.

Genes Genet. Syst. 79:351-359(2004) · UniProtKB (36) · Mapped (4)

Hagfish leukocytes express a paired receptor family with a variable domain resembling those of antigen receptors.

Suzuki T., Shin-I T., Fujiyama A., Kohara Y., Kasahara M.

J. Immunol. 174:2885-2891(2005) · UniProtKB (11)

Identification of ciliated sensory neuron-expressed genes in Caenorhabditis elegans using targeted pull-down of poly(A) tails.

Kunitomo H., Uesugi H., Kohara Y., Iino Y.

Genome Biol. 6:R17-R17(2005) · Mapped (23)

Cyanobacterial genes transmitted to the nucleus before divergence of red algae in the Chromista.

Nozaki H., Matsuzaki M., Misumi O., Kuroiwa H., Hasegawa M., Higashiyama T., Shin-I T., Kohara Y., Ogasawara N., Kuroiwa T.

J. Mol. Evol. 59:103-113(2004) · UniProtKB (6)

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