1 - 25 of 50 results for author:"Fedorov A.A." in Literature citations
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| Structure of Salmonella typhimurium OMP synthase in a complete substrate complex. Grubmeyer C., Hansen M.R., Fedorov A.A., Almo S.C. Biochemistry 51:4397-4405(2012) · Mapped (1) |
| Homology models guide discovery of diverse enzyme specificities among dipeptide epimerases in the enolase superfamily. Lukk T., Sakai A., Kalyanaraman C., Brown S.D., Imker H.J., Song L., Fedorov A.A., Fedorov E.V., Toro R., Hillerich B. et al. Proc. Natl. Acad. Sci. U.S.A. 109:4122-4127(2012) · UniProtKB (6) |
| Mechanism of the orotidine 5'-monophosphate decarboxylase-catalyzed reaction: importance of residues in the orotate binding site. Iiams V., Desai B.J., Fedorov A.A., Fedorov E.V., Almo S.C., Gerlt J.A. Biochemistry 50:8497-8507(2011) · Mapped (1) |
| Rescue of the orphan enzyme isoguanine deaminase. Hitchcock D.S., Fedorov A.A., Fedorov E.V., Dangott L.J., Almo S.C., Raushel F.M. Biochemistry 50:5555-5557(2011) · Mapped (1) |
| Three-dimensional structure and catalytic mechanism of cytosine deaminase. Hall R.S., Fedorov A.A., Xu C., Fedorov E.V., Almo S.C., Raushel F.M. Biochemistry 50:5077-5085(2011) · Mapped (1) |
| Functional identification and structure determination of two novel prolidases from cog1228 in the amidohydrolase superfamily . Xiang D.F., Patskovsky Y., Xu C., Fedorov A.A., Fedorov E.V., Sisco A.A., Sauder J.M., Burley S.K., Almo S.C., Raushel F.M. Biochemistry 49:6791-6803(2010) · UniProtKB (1) |
| Structure, evolutionary conservation, and conformational dynamics of Homo sapiens fascin-1, an F-actin crosslinking protein. Sedeh R.S., Fedorov A.A., Fedorov E.V., Ono S., Matsumura F., Almo S.C., Bathe M. J. Mol. Biol. 400:589-604(2010) · UniProtKB (1) · Mapped (3) |
| Conformational changes in orotidine 5'-monophosphate decarboxylase: "remote" residues that stabilize the active conformation. Wood B.M., Amyes T.L., Fedorov A.A., Fedorov E.V., Shabila A., Almo S.C., Richard J.P., Gerlt J.A. Biochemistry 49:3514-3516(2010) · Mapped (1) |
| The hunt for 8-oxoguanine deaminase. Hall R.S., Fedorov A.A., Marti-Arbona R., Fedorov E.V., Kolb P., Sauder J.M., Burley S.K., Shoichet B.K., Almo S.C., Raushel F.M. J. Am. Chem. Soc. 132:1762-1763(2010) · UniProtKB (1) |
| Structure, mechanism, and substrate profile for Sco3058: the closest bacterial homologue to human renal dipeptidase . Cummings J.A., Nguyen T.T., Fedorov A.A., Kolb P., Xu C., Fedorov E.V., Shoichet B.K., Barondeau D.P., Almo S.C., Raushel F.M. Biochemistry 49:611-622(2010) · UniProtKB (1) |
| Computation-facilitated assignment of the function in the enolase superfamily: a regiochemically distinct galactarate dehydratase from Oceanobacillus iheyensis . Rakus J.F., Kalyanaraman C., Fedorov A.A., Fedorov E.V., Mills-Groninger F.P., Toro R., Bonanno J., Bain K., Sauder J.M., Burley S.K. et al. Biochemistry 48:11546-11558(2009) · UniProtKB (1) |
| The mechanism of the reaction catalyzed by uronate isomerase illustrates how an isomerase may have evolved from a hydrolase within the amidohydrolase superfamily. Nguyen T.T., Fedorov A.A., Williams L., Fedorov E.V., Li Y., Xu C., Almo S.C., Raushel F.M. Biochemistry 48:8879-8890(2009) · UniProtKB (1) |
| Annotating enzymes of uncertain function: the deacylation of D-amino acids by members of the amidohydrolase superfamily. Cummings J.A., Fedorov A.A., Xu C., Brown S., Fedorov E., Babbitt P.C., Almo S.C., Raushel F.M. Biochemistry 48:6469-6481(2009) · UniProtKB (1) |
| Mechanism of the orotidine 5'-monophosphate decarboxylase-catalyzed reaction: evidence for substrate destabilization. Chan K.K., Wood B.M., Fedorov A.A., Fedorov E.V., Imker H.J., Amyes T.L., Richard J.P., Almo S.C., Gerlt J.A. Biochemistry 48:5518-5531(2009) · Mapped (2) |
| Evolution of enzymatic activities in the enolase superfamily: stereochemically distinct mechanisms in two families of cis,cis-muconate lactonizing enzymes. Sakai A., Fedorov A.A., Fedorov E.V., Schnoes A.M., Glasner M.E., Brown S., Rutter M.E., Bain K., Chang S., Gheyi T. et al. Biochemistry 48:1445-1453(2009) · UniProtKB (2) |
| Functional annotation and three-dimensional structure of Dr0930 from Deinococcus radiodurans, a close relative of phosphotriesterase in the amidohydrolase superfamily. Xiang D.F., Kolb P., Fedorov A.A., Meier M.M., Fedorov L.V., Nguyen T.T., Sterner R., Almo S.C., Shoichet B.K., Raushel F.M. Biochemistry 48:2237-2247(2009) · UniProtKB (1) |
| Discovery of a dipeptide epimerase enzymatic function guided by homology modeling and virtual screening. Kalyanaraman C., Imker H.J., Fedorov A.A., Fedorov E.V., Glasner M.E., Babbitt P.C., Almo S.C., Gerlt J.A., Jacobson M.P. Structure 16:1668-1677(2008) · UniProtKB (1) |
| Evolution of enzymatic activities in the enolase superfamily: L-rhamnonate dehydratase. Rakus J.F., Fedorov A.A., Fedorov E.V., Glasner M.E., Hubbard B.K., Delli J.D., Babbitt P.C., Almo S.C., Gerlt J.A. Biochemistry 47:9944-9954(2008) · UniProtKB (4) |
| Mixed-lineage kinase 1 and mixed-lineage kinase 3 subtype-selective dihydronaphthyl[3,4-a]pyrrolo[3,4-c]carbazole-5-ones: optimization, mixed-lineage kinase 1 crystallography, and oral in vivo activity in 1-methyl-4-phenyltetrahydropyridine models. Hudkins R.L., Diebold J.L., Tao M., Josef K.A., Park C.H., Angeles T.S., Aimone L.D., Husten J., Ator M.A., Meyer S.L. et al. J. Med. Chem. 51:5680-5689(2008) · UniProtKB (1) |
| Structural basis for substrate specificity in phosphate binding (beta/alpha)8-barrels: D-allulose 6-phosphate 3-epimerase from Escherichia coli K-12. Chan K.K., Fedorov A.A., Fedorov E.V., Almo S.C., Gerlt J.A. Biochemistry 47:9608-9617(2008) · UniProtKB (1) |
| Evolution of enzymatic activities in the enolase superfamily: D-Mannonate dehydratase from Novosphingobium aromaticivorans. Rakus J.F., Fedorov A.A., Fedorov E.V., Glasner M.E., Vick J.E., Babbitt P.C., Almo S.C., Gerlt J.A. Biochemistry 46:12896-12908(2007) · UniProtKB (1) |
| Evolution of enzymatic activities in the enolase superfamily: L-talarate/galactarate dehydratase from Salmonella typhimurium LT2. Yew W.S., Fedorov A.A., Fedorov E.V., Almo S.C., Gerlt J.A. Biochemistry 46:9564-9577(2007) · UniProtKB (1) |
| Prediction and assignment of function for a divergent N-succinyl amino acid racemase. Song L., Kalyanaraman C., Fedorov A.A., Fedorov E.V., Glasner M.E., Brown S., Imker H.J., Babbitt P.C., Almo S.C., Jacobson M.P. et al. Nat. Chem. Biol. 3:486-491(2007) · UniProtKB (1) |
| Structure-based activity prediction for an enzyme of unknown function. Hermann J.C., Marti-Arbona R., Fedorov A.A., Fedorov E., Almo S.C., Shoichet B.K., Raushel F.M. Nature 448:775-779(2007) · UniProtKB (1) |
| Structural diversity within the mononuclear and binuclear active sites of N-acetyl-D-glucosamine-6-phosphate deacetylase. Hall R.S., Brown S., Fedorov A.A., Fedorov E.V., Xu C., Babbitt P.C., Almo S.C., Raushel F.M. Biochemistry 46:7953-7962(2007) · UniProtKB (1) |