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46
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for author:"Dodson R."
in Literature Citations
| Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils. Ward N.L., Challacombe J.F., Janssen P.H., Henrissat B., Coutinho P.M., Wu M., Xie G., Haft D.H., Sait M., Badger J. et al. Appl. Environ. Microbiol. 75:2046-2056(2009) · UniProtKB (15,895) |
| Acidithiobacillus ferrooxidans metabolism: from genome sequence to industrial applications. Valdes J., Pedroso I., Quatrini R., Dodson R.J., Tettelin H., Blake R. II, Eisen J.A., Holmes D.S. BMC Genomics 9:597-597(2008) · UniProtKB (3,120) |
| Complete genome sequence of the N2-fixing broad host range endophyte Klebsiella pneumoniae 342 and virulence predictions verified in mice. Fouts D.E., Tyler H.L., DeBoy R.T., Daugherty S., Ren Q., Badger J.H., Durkin A.S., Huot H., Shrivastava S., Kothari S. et al. PLoS Genet. 4:E1000141-E1000141(2008) · UniProtKB (5,738) |
| Comparative genomic evidence for a close relationship between the dimorphic prosthecate bacteria Hyphomonas neptunium and Caulobacter crescentus. Badger J.H., Hoover T.R., Brun Y.V., Weiner R.M., Laub M.T., Alexandre G., Mrazek J., Ren Q., Paulsen I.T., Nelson K.E. et al. J. Bacteriol. 188:6841-6850(2006) · UniProtKB (3,499) |
| Genome sequence of Synechococcus CC9311: insights into adaptation to a coastal environment. Palenik B., Ren Q., Dupont C.L., Myers G.S., Heidelberg J.F., Badger J.H., Madupu R., Nelson W.C., Brinkac L.M., Dodson R.J. et al. Proc. Natl. Acad. Sci. U.S.A. 103:13555-13559(2006) · UniProtKB (2,882) |
| Skewed genomic variability in strains of the toxigenic bacterial pathogen, Clostridium perfringens. Myers G.S.A., Rasko D.A., Cheung J.K., Ravel J., Seshadri R., DeBoy R.T., Ren Q., Varga J., Awad M.M., Brinkac L.M. et al. Genome Res. 16:1031-1040(2006) · UniProtKB (5,484) |
| Comparative genomics of emerging human ehrlichiosis agents. Dunning Hotopp J.C., Lin M., Madupu R., Crabtree J., Angiuoli S.V., Eisen J.A., Seshadri R., Ren Q., Wu M., Utterback T.R. et al. PLoS Genet. 2:208-222(2006) · UniProtKB (3,275) |
| Life in hot carbon monoxide: the complete genome sequence of Carboxydothermus hydrogenoformans Z-2901. Wu M., Ren Q., Durkin A.S., Daugherty S.C., Brinkac L.M., Dodson R.J., Madupu R., Sullivan S.A., Kolonay J.F., Nelson W.C. et al. PLoS Genet. 1:563-574(2005) · UniProtKB (2,615) |
| Genome analysis of multiple pathogenic isolates of Streptococcus agalactiae: implications for the microbial 'pan-genome'. Tettelin H., Masignani V., Cieslewicz M.J., Donati C., Medini D., Ward N.L., Angiuoli S.V., Crabtree J., Jones A.L., Durkin A.S. et al. Proc. Natl. Acad. Sci. U.S.A. 102:13950-13955(2005) · UniProtKB (13,271) |
| Whole-genome sequence analysis of Pseudomonas syringae pv. phaseolicola 1448A reveals divergence among pathovars in genes involved in virulence and transposition. Joardar V., Lindeberg M., Jackson R.W., Selengut J., Dodson R., Brinkac L.M., Daugherty S.C., DeBoy R.T., Durkin A.S., Gwinn Giglio M. et al. J. Bacteriol. 187:6488-6498(2005) · UniProtKB (5,045) |
| The psychrophilic lifestyle as revealed by the genome sequence of Colwellia psychrerythraea 34H through genomic and proteomic analyses. Methe B.A., Nelson K.E., Deming J.W., Momen B., Melamud E., Zhang X., Moult J., Madupu R., Nelson W.C., Dodson R.J. et al. Proc. Natl. Acad. Sci. U.S.A. 102:10913-10918(2005) · UniProtKB (4,872) |
| Complete genome sequence of the plant commensal Pseudomonas fluorescens Pf-5. Paulsen I.T., Press C.M., Ravel J., Kobayashi D.Y., Myers G.S.A., Mavrodi D.V., DeBoy R.T., Seshadri R., Ren Q., Madupu R. et al. Nat. Biotechnol. 23:873-878(2005) · UniProtKB (6,137) |
| Insights on evolution of virulence and resistance from the complete genome analysis of an early methicillin-resistant Staphylococcus aureus strain and a biofilm-producing methicillin-resistant Staphylococcus epidermidis strain. Gill S.R., Fouts D.E., Archer G.L., Mongodin E.F., DeBoy R.T., Ravel J., Paulsen I.T., Kolonay J.F., Brinkac L.M., Beanan M.J. et al. J. Bacteriol. 187:2426-2438(2005) · UniProtKB (5,172) |
| Major structural differences and novel potential virulence mechanisms from the genomes of multiple Campylobacter species. Fouts D.E., Mongodin E.F., Mandrell R.E., Miller W.G., Rasko D.A., Ravel J., Brinkac L.M., DeBoy R.T., Parker C.T., Daugherty S.C. et al. PLoS Biol. 3:72-85(2005) · UniProtKB (1,836) |
| Genome sequence of the PCE-dechlorinating bacterium Dehalococcoides ethenogenes. Seshadri R., Adrian L., Fouts D.E., Eisen J.A., Phillippy A.M., Methe B.A., Ward N.L., Nelson W.C., DeBoy R.T., Khouri H.M. et al. Science 307:105-108(2005) · UniProtKB (1,502) |
| Genome sequence of Silicibacter pomeroyi reveals adaptations to the marine environment. Moran M.A., Buchan A., Gonzalez J.M., Heidelberg J.F., Whitman W.B., Kiene R.P., Henriksen J.R., King G.M., Belas R., Fuqua C. et al. Nature 432:910-913(2004) · UniProtKB (4,242) |
| Genomic insights into methanotrophy: the complete genome sequence of Methylococcus capsulatus (Bath). Ward N.L., Larsen O., Sakwa J., Bruseth L., Khouri H.M., Durkin A.S., Dimitrov G., Jiang L., Scanlan D., Kang K.H. et al. PLoS Biol. 2:1616-1628(2004) · UniProtKB (2,925) |
| Structural flexibility in the Burkholderia mallei genome. Nierman W.C., DeShazer D., Kim H.S., Tettelin H., Nelson K.E., Feldblyum T.V., Ulrich R.L., Ronning C.M., Brinkac L.M., Daugherty S.C. et al. Proc. Natl. Acad. Sci. U.S.A. 101:14246-14251(2004) · UniProtKB (4,797) |
| Whole genome comparisons of serotype 4b and 1/2a strains of the food-borne pathogen Listeria monocytogenes reveal new insights into the core genome components of this species. Nelson K.E., Fouts D.E., Mongodin E.F., Ravel J., DeBoy R.T., Kolonay J.F., Rasko D.A., Angiuoli S.V., Gill S.R., Paulsen I.T. et al. Nucleic Acids Res. 32:2386-2395(2004) · UniProtKB (8,897) |
| The genome sequence of the anaerobic, sulfate-reducing bacterium Desulfovibrio vulgaris Hildenborough. Heidelberg J.F., Seshadri R., Haveman S.A., Hemme C.L., Paulsen I.T., Kolonay J.F., Eisen J.A., Ward N.L., Methe B.A., Brinkac L.M. et al. Nat. Biotechnol. 22:554-559(2004) · UniProtKB (3,517) |
| Comparison of the genome of the oral pathogen Treponema denticola with other spirochete genomes. Seshadri R., Myers G.S.A., Tettelin H., Eisen J.A., Heidelberg J.F., Dodson R.J., Davidsen T.M., DeBoy R.T., Fouts D.E., Haft D.H. et al. Proc. Natl. Acad. Sci. U.S.A. 101:5646-5651(2004) · UniProtKB (2,753) |
| Genome of Geobacter sulfurreducens: metal reduction in subsurface environments. Methe B.A., Nelson K.E., Eisen J.A., Paulsen I.T., Nelson W.C., Heidelberg J.F., Wu D., Wu M., Ward N.L., Beanan M.J. et al. Science 302:1967-1969(2003) · UniProtKB (3,415) |
| The preparation and properties of crystalline yeast aldolase. VANDERHEIDEN B.S., MEINHART J.O., DODSON R.G., KREBS E.G. J. Biol. Chem. 237:2095-2098(1962) · Mapped (1) |
| Complete genome sequence of the oral pathogenic bacterium Porphyromonas gingivalis strain W83. Nelson K.E., Fleischmann R.D., DeBoy R.T., Paulsen I.T., Fouts D.E., Eisen J.A., Daugherty S.C., Dodson R.J., Durkin A.S., Gwinn M.L. et al. J. Bacteriol. 185:5591-5601(2003) · UniProtKB (1,863) |
| The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000. Buell C.R., Joardar V., Lindeberg M., Selengut J., Paulsen I.T., Gwinn M.L., Dodson R.J., DeBoy R.T., Durkin A.S., Kolonay J.F. et al. Proc. Natl. Acad. Sci. U.S.A. 100:10181-10186(2003) · UniProtKB (5,425) |
