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38
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for author:"DeBoy R.T."
in Literature Citations
| Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils. Ward N.L., Challacombe J.F., Janssen P.H., Henrissat B., Coutinho P.M., Wu M., Xie G., Haft D.H., Sait M., Badger J. et al. Appl. Environ. Microbiol. 75:2046-2056(2009) · UniProtKB (15,895) |
| Complete genome sequence of the N2-fixing broad host range endophyte Klebsiella pneumoniae 342 and virulence predictions verified in mice. Fouts D.E., Tyler H.L., DeBoy R.T., Daugherty S., Ren Q., Badger J.H., Durkin A.S., Huot H., Shrivastava S., Kothari S. et al. PLoS Genet. 4:E1000141-E1000141(2008) · UniProtKB (5,738) |
| Insights into plant cell wall degradation from the genome sequence of the soil bacterium Cellvibrio japonicus. DeBoy R.T., Mongodin E.F., Fouts D.E., Tailford L.E., Khouri H., Emerson J.B., Mohamoud Y., Watkins K., Henrissat B., Gilbert H.J. et al. J. Bacteriol. 190:5455-5463(2008) · UniProtKB (3,712) |
| Genome sequence and identification of candidate vaccine antigens from the animal pathogen Dichelobacter nodosus. Myers G.S.A., Parker D., Al-Hasani K., Kennan R.M., Seemann T., Ren Q., Badger J.H., Selengut J.D., Deboy R.T., Tettelin H. et al. Nat. Biotechnol. 25:569-575(2007) · UniProtKB (1,273) |
| Secrets of soil survival revealed by the genome sequence of Arthrobacter aurescens TC1. Mongodin E.F., Shapir N., Daugherty S.C., DeBoy R.T., Emerson J.B., Shvartzbeyn A., Radune D., Vamathevan J., Riggs F., Grinberg V. et al. PLoS Genet. 2:2094-2106(2006) · UniProtKB (4,564) |
| Skewed genomic variability in strains of the toxigenic bacterial pathogen, Clostridium perfringens. Myers G.S.A., Rasko D.A., Cheung J.K., Ravel J., Seshadri R., DeBoy R.T., Ren Q., Varga J., Awad M.M., Brinkac L.M. et al. Genome Res. 16:1031-1040(2006) · UniProtKB (5,484) |
| The genome of Salinibacter ruber: convergence and gene exchange among hyperhalophilic bacteria and archaea. Mongodin E.F., Nelson K.E., Daugherty S., DeBoy R.T., Wister J., Khouri H., Weidman J., Walsh D.A., Papke R.T., Sanchez Perez G. et al. Proc. Natl. Acad. Sci. U.S.A. 102:18147-18152(2005) · UniProtKB (2,812) |
| Genome analysis of multiple pathogenic isolates of Streptococcus agalactiae: implications for the microbial 'pan-genome'. Tettelin H., Masignani V., Cieslewicz M.J., Donati C., Medini D., Ward N.L., Angiuoli S.V., Crabtree J., Jones A.L., Durkin A.S. et al. Proc. Natl. Acad. Sci. U.S.A. 102:13950-13955(2005) · UniProtKB (13,271) |
| Whole-genome sequence analysis of Pseudomonas syringae pv. phaseolicola 1448A reveals divergence among pathovars in genes involved in virulence and transposition. Joardar V., Lindeberg M., Jackson R.W., Selengut J., Dodson R., Brinkac L.M., Daugherty S.C., DeBoy R.T., Durkin A.S., Gwinn Giglio M. et al. J. Bacteriol. 187:6488-6498(2005) · UniProtKB (5,045) |
| The psychrophilic lifestyle as revealed by the genome sequence of Colwellia psychrerythraea 34H through genomic and proteomic analyses. Methe B.A., Nelson K.E., Deming J.W., Momen B., Melamud E., Zhang X., Moult J., Madupu R., Nelson W.C., Dodson R.J. et al. Proc. Natl. Acad. Sci. U.S.A. 102:10913-10918(2005) · UniProtKB (4,872) |
| Gene transfer and genome plasticity in Thermotoga maritima, a model hyperthermophilic species. Mongodin E.F., Hance I.R., Deboy R.T., Gill S.R., Daugherty S., Huber R., Fraser C.M., Stetter K., Nelson K.E. J. Bacteriol. 187:4935-4944(2005) · UniProtKB (49) |
| Complete genome sequence of the plant commensal Pseudomonas fluorescens Pf-5. Paulsen I.T., Press C.M., Ravel J., Kobayashi D.Y., Myers G.S.A., Mavrodi D.V., DeBoy R.T., Seshadri R., Ren Q., Madupu R. et al. Nat. Biotechnol. 23:873-878(2005) · UniProtKB (6,137) |
| Insights on evolution of virulence and resistance from the complete genome analysis of an early methicillin-resistant Staphylococcus aureus strain and a biofilm-producing methicillin-resistant Staphylococcus epidermidis strain. Gill S.R., Fouts D.E., Archer G.L., Mongodin E.F., DeBoy R.T., Ravel J., Paulsen I.T., Kolonay J.F., Brinkac L.M., Beanan M.J. et al. J. Bacteriol. 187:2426-2438(2005) · UniProtKB (5,172) |
| Major structural differences and novel potential virulence mechanisms from the genomes of multiple Campylobacter species. Fouts D.E., Mongodin E.F., Mandrell R.E., Miller W.G., Rasko D.A., Ravel J., Brinkac L.M., DeBoy R.T., Parker C.T., Daugherty S.C. et al. PLoS Biol. 3:72-85(2005) · UniProtKB (1,836) |
| Genome sequence of the PCE-dechlorinating bacterium Dehalococcoides ethenogenes. Seshadri R., Adrian L., Fouts D.E., Eisen J.A., Phillippy A.M., Methe B.A., Ward N.L., Nelson W.C., DeBoy R.T., Khouri H.M. et al. Science 307:105-108(2005) · UniProtKB (1,502) |
| Genome sequence of Silicibacter pomeroyi reveals adaptations to the marine environment. Moran M.A., Buchan A., Gonzalez J.M., Heidelberg J.F., Whitman W.B., Kiene R.P., Henriksen J.R., King G.M., Belas R., Fuqua C. et al. Nature 432:910-913(2004) · UniProtKB (4,242) |
| Genomic insights into methanotrophy: the complete genome sequence of Methylococcus capsulatus (Bath). Ward N.L., Larsen O., Sakwa J., Bruseth L., Khouri H.M., Durkin A.S., Dimitrov G., Jiang L., Scanlan D., Kang K.H. et al. PLoS Biol. 2:1616-1628(2004) · UniProtKB (2,925) |
| Structural flexibility in the Burkholderia mallei genome. Nierman W.C., DeShazer D., Kim H.S., Tettelin H., Nelson K.E., Feldblyum T.V., Ulrich R.L., Ronning C.M., Brinkac L.M., Daugherty S.C. et al. Proc. Natl. Acad. Sci. U.S.A. 101:14246-14251(2004) · UniProtKB (4,797) |
| Whole genome comparisons of serotype 4b and 1/2a strains of the food-borne pathogen Listeria monocytogenes reveal new insights into the core genome components of this species. Nelson K.E., Fouts D.E., Mongodin E.F., Ravel J., DeBoy R.T., Kolonay J.F., Rasko D.A., Angiuoli S.V., Gill S.R., Paulsen I.T. et al. Nucleic Acids Res. 32:2386-2395(2004) · UniProtKB (8,897) |
| The genome sequence of the anaerobic, sulfate-reducing bacterium Desulfovibrio vulgaris Hildenborough. Heidelberg J.F., Seshadri R., Haveman S.A., Hemme C.L., Paulsen I.T., Kolonay J.F., Eisen J.A., Ward N.L., Methe B.A., Brinkac L.M. et al. Nat. Biotechnol. 22:554-559(2004) · UniProtKB (3,517) |
| Comparison of the genome of the oral pathogen Treponema denticola with other spirochete genomes. Seshadri R., Myers G.S.A., Tettelin H., Eisen J.A., Heidelberg J.F., Dodson R.J., Davidsen T.M., DeBoy R.T., Fouts D.E., Haft D.H. et al. Proc. Natl. Acad. Sci. U.S.A. 101:5646-5651(2004) · UniProtKB (2,753) |
| Phylogenomics of the reproductive parasite Wolbachia pipientis wMel: a streamlined genome overrun by mobile genetic elements. Wu M., Sun L.V., Vamathevan J.J., Riegler M., DeBoy R.T., Brownlie J.C., McGraw E.A., Martin W., Esser C., Ahmadinejad N. et al. PLoS Biol. 2:327-341(2004) · UniProtKB (1,161) |
| Genome of Geobacter sulfurreducens: metal reduction in subsurface environments. Methe B.A., Nelson K.E., Eisen J.A., Paulsen I.T., Nelson W.C., Heidelberg J.F., Wu D., Wu M., Ward N.L., Beanan M.J. et al. Science 302:1967-1969(2003) · UniProtKB (3,415) |
| Complete genome sequence of the oral pathogenic bacterium Porphyromonas gingivalis strain W83. Nelson K.E., Fleischmann R.D., DeBoy R.T., Paulsen I.T., Fouts D.E., Eisen J.A., Daugherty S.C., Dodson R.J., Durkin A.S., Gwinn M.L. et al. J. Bacteriol. 185:5591-5601(2003) · UniProtKB (1,863) |
| The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000. Buell C.R., Joardar V., Lindeberg M., Selengut J., Paulsen I.T., Gwinn M.L., Dodson R.J., DeBoy R.T., Durkin A.S., Kolonay J.F. et al. Proc. Natl. Acad. Sci. U.S.A. 100:10181-10186(2003) · UniProtKB (5,425) |
