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Complete genome sequences of Desulfosporosinus orientis DSM765T, Desulfosporosinus youngiae DSM17734T, Desulfosporosinus meridiei DSM13257T, and Desulfosporosinus acidiphilus DSM22704T.

Pester M., Brambilla E., Alazard D., Rattei T., Weinmaier T., Han J., Lucas S., Lapidus A., Cheng J.F., Goodwin L. et al.

J. Bacteriol. 194:6300-6301(2012) · UniProtKB (4,478)

Complete genome sequence of the thermophilic, piezophilic, heterotrophic bacterium Marinitoga piezophila KA3.

Lucas S., Han J., Lapidus A., Cheng J.F., Goodwin L.A., Pitluck S., Peters L., Mikhailova N., Teshima H., Detter J.C. et al.

J. Bacteriol. 194:5974-5975(2012) · UniProtKB (2)

Complete genome sequence of Desulfurococcus fermentans, a hyperthermophilic cellulolytic crenarchaeon isolated from a freshwater hot spring in Kamchatka, Russia.

Susanti D., Johnson E.F., Rodriguez J.R., Anderson I., Perevalova A.A., Kyrpides N., Lucas S., Han J., Lapidus A., Cheng J.F. et al.

J. Bacteriol. 194:5703-5704(2012) · UniProtKB (1,419)

An independent genome duplication inferred from Hox paralogs in the American paddlefish--a representative basal ray-finned fish and important comparative reference.

Crow K.D., Smith C.D., Cheng J.F., Wagner G.P., Amemiya C.T.

Genome Biol Evol 4:937-953(2012) · UniProtKB (13)

Complete genome sequence of the sulfur compounds oxidizing chemolithoautotroph Sulfuricurvum kujiense type strain (YK-1(T)).

Han C., Kotsyurbenko O., Chertkov O., Held B., Lapidus A., Nolan M., Lucas S., Hammon N., Deshpande S., Cheng J.F. et al.

Stand Genomic Sci 6:94-103(2012) · UniProtKB (2,794)

Complete genome sequence of the rapeseed plant-growth promoting Serratia plymuthica strain AS9.

Neupane S., Hogberg N., Alstrom S., Lucas S., Han J., Lapidus A., Cheng J.F., Bruce D., Goodwin L., Pitluck S. et al.

Stand Genomic Sci 6:54-62(2012) · UniProtKB (4,950)

Complete genome sequence of Halopiger xanaduensis type strain (SH-6(T)).

Anderson I., Tindall B.J., Rohde M., Lucas S., Han J., Lapidus A., Cheng J.F., Goodwin L., Pitluck S., Peters L. et al.

Stand Genomic Sci 6:31-42(2012) · UniProtKB (4,221)

Complete genome sequence of the aerobic, heterotroph Marinithermus hydrothermalis type strain (T1(T)) from a deep-sea hydrothermal vent chimney.

Copeland A., Gu W., Yasawong M., Lapidus A., Lucas S., Deshpande S., Pagani I., Tapia R., Cheng J.F., Goodwin L.A. et al.

Stand Genomic Sci 6:21-30(2012) · UniProtKB (2,194)

Complete genome of the cellulolytic ruminal bacterium Ruminococcus albus 7.

Suen G., Stevenson D.M., Bruce D.C., Chertkov O., Copeland A., Cheng J.F., Detter C., Detter J.C., Goodwin L.A., Han C.S. et al.

J. Bacteriol. 193:5574-5575(2011) · UniProtKB (3,775)

Complete genome sequence of the hyperthermophilic chemolithoautotroph Pyrolobus fumarii type strain (1A).

Anderson I., Goker M., Nolan M., Lucas S., Hammon N., Deshpande S., Cheng J.F., Tapia R., Han C., Goodwin L. et al.

Stand Genomic Sci 4:381-392(2011) · UniProtKB (1,967)

Complete genome sequence of Treponema succinifaciens type strain (6091).

Han C., Gronow S., Teshima H., Lapidus A., Nolan M., Lucas S., Hammon N., Deshpande S., Cheng J.F., Zeytun A. et al.

Stand Genomic Sci 4:361-370(2011) · UniProtKB (14)

Complete genome sequence of Haliscomenobacter hydrossis type strain (O).

Daligault H., Lapidus A., Zeytun A., Nolan M., Lucas S., Del Rio T.G., Tice H., Cheng J.F., Tapia R., Han C. et al.

Stand Genomic Sci 4:352-360(2011) · UniProtKB (6,704)

Complete genome sequence of Tsukamurella paurometabola type strain (no. 33).

Munk A.C., Lapidus A., Lucas S., Nolan M., Tice H., Cheng J.F., Del Rio T.G., Goodwin L., Pitluck S., Liolios K. et al.

Stand Genomic Sci 4:342-351(2011) · UniProtKB (15)

Complete genome sequence of the thermophilic sulfur-reducer Hippea maritima type strain (MH(2)).

Huntemann M., Lu M., Nolan M., Lapidus A., Lucas S., Hammon N., Deshpande S., Cheng J.F., Tapia R., Han C. et al.

Stand Genomic Sci 4:303-311(2011) · UniProtKB (2)

Complete genome sequence and updated annotation of Desulfovibrio alaskensis G20.

Hauser L.J., Land M.L., Brown S.D., Larimer F., Keller K.L., Rapp-Giles B.J., Price M.N., Lin M., Bruce D.C., Detter J.C. et al.

J. Bacteriol. 193:4268-4269(2011) · UniProtKB (3,220)

Complete genome sequence of Odoribacter splanchnicus type strain (1651/6).

Goker M., Gronow S., Zeytun A., Nolan M., Lucas S., Lapidus A., Hammon N., Deshpande S., Cheng J.F., Pitluck S. et al.

Stand Genomic Sci 4:200-209(2011) · UniProtKB (3,479)

Complete genome sequence of Bacteroides salanitronis type strain (BL78).

Gronow S., Held B., Lucas S., Lapidus A., Del Rio T.G., Nolan M., Tice H., Deshpande S., Cheng J.F., Pitluck S. et al.

Stand Genomic Sci 4:191-199(2011) · UniProtKB (3,608)

Complete genome sequence of Riemerella anatipestifer type strain (ATCC 11845).

Mavromatis K., Lu M., Misra M., Lapidus A., Nolan M., Lucas S., Hammon N., Deshpande S., Cheng J.F., Tapia R. et al.

Stand Genomic Sci 4:144-153(2011) · UniProtKB (1,969)

Complete genome sequence of Hydrogenobacter thermophilus type strain (TK-6).

US DOE Joint Genome Institute (JGI-PGF)
Zeytun A., Sikorski J., Nolan M., Lapidus A., Lucas S., Han J., Tice H., Cheng J.F., Tapia R., Goodwin L. et al.

Stand. Genomic Sci. 4:131-143(2011) · UniProtKB (8)

Exploring the symbiotic pangenome of the nitrogen-fixing bacterium Sinorhizobium meliloti.

Galardini M., Mengoni A., Brilli M., Pini F., Fioravanti A., Lucas S., Lapidus A., Cheng J.F., Goodwin L., Pitluck S. et al.

BMC Genomics 12:235-235(2011) · UniProtKB (12,723)

The Arabidopsis lyrata genome sequence and the basis of rapid genome size change.

Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M., Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H. et al.

Nat. Genet. 43:476-481(2011) · UniProtKB (32,113)

Complete genome sequence of Desulfobulbus propionicus type strain (1pr3).

Pagani I., Lapidus A., Nolan M., Lucas S., Hammon N., Deshpande S., Cheng J.F., Chertkov O., Davenport K., Tapia R. et al.

Stand Genomic Sci 4:100-110(2011) · UniProtKB (3,259)

Complete genome sequence of Cellulophaga algicola type strain (IC166).

Abt B., Lu M., Misra M., Han C., Nolan M., Lucas S., Hammon N., Deshpande S., Cheng J.F., Tapia R. et al.

Stand. Genomic Sci. 4:72-80(2010) · UniProtKB (1)

Complete genome sequence of Isosphaera pallida type strain (IS1B).

US DOE Joint Genome Institute (JGI-PGF)
Goker M., Cleland D., Saunders E., Lapidus A., Nolan M., Lucas S., Hammon N., Deshpande S., Cheng J.F., Tapia R. et al.

Stand. Genomic Sci. 4:63-71(2011) · UniProtKB (3,721)

Complete genome sequence of Calditerrivibrio nitroreducens type strain (Yu37-1).

Pitluck S., Sikorski J., Zeytun A., Lapidus A., Nolan M., Lucas S., Hammon N., Deshpande S., Cheng J.F., Tapia R. et al.

Stand. Genomic Sci. 4:54-62(2011) · UniProtKB (2,089)

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