1 - 25 of 40 results for author:"Birren B.W." in Literature citations
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| Whole Genome Pyrosequencing of Rare Hepatitis C Virus Genotypes Enhances Subtype Classification and Identification of Naturally Occurring Drug Resistance Variants. Newman R.M., Kuntzen T., Weiner B., Berical A., Charlebois P., Kuiken C., Murphy D.G., Simmonds P., Bennett P., Lennon N.J. et al. J. Infect. Dis. 0:0-0(2012) · UniProtKB (30) |
| Comparative genome analysis of Trichophyton rubrum and related dermatophytes reveals candidate genes involved in infection. Martinez D.A., Oliver B.G., Graeser Y., Goldberg J.M., Li W., Martinez-Rossi N.M., Monod M., Shelest E., Barton R.C., Birch E. et al. MBio 3:E259-E259(2012) · UniProtKB (43,572) |
| Lifestyle transitions in plant pathogenic Colletotrichum fungi deciphered by genome and transcriptome analyses. O'Connell R.J., Thon M.R., Hacquard S., Amyotte S.G., Kleemann J., Torres M.F., Damm U., Buiate E.A., Epstein L., Alkan N. et al. Nat. Genet. 44:1060-1065(2012) · UniProtKB (28,207) |
| Whole genome deep sequencing of HIV-1 reveals the impact of early minor variants upon immune recognition during acute infection. Henn M.R., Boutwell C.L., Charlebois P., Lennon N.J., Power K.A., Macalalad A.R., Berlin A.M., Malboeuf C.M., Ryan E.M., Gnerre S. et al. PLoS Pathog. 8:e1002529-e1002529(2012) · UniProtKB (832) |
| Genomic epidemiology of the Escherichia coli O104:H4 outbreaks in Europe, 2011. Grad Y.H., Lipsitch M., Feldgarden M., Arachchi H.M., Cerqueira G.C., Fitzgerald M., Godfrey P., Haas B.J., Murphy C.I., Russ C. et al. Proc. Natl. Acad. Sci. U.S.A. 109:3065-3070(2012) · UniProtKB (66,043) |
| Molecular evolution of West Nile virus in a northern temperate region: Connecticut, USA 1999-2008. Armstrong P.M., Vossbrinck C.R., Andreadis T.G., Anderson J.F., Pesko K.N., Newman R.M., Lennon N.J., Birren B.W., Ebel G.D., Henn M.R. Virology 417:203-210(2011) · UniProtKB (68) |
| Comparative functional genomics of the fission yeasts. Rhind N., Chen Z., Yassour M., Thompson D.A., Haas B.J., Habib N., Wapinski I., Roy S., Lin M.F., Heiman D.I. et al. Science 332:930-936(2011) · UniProtKB (5,188) |
| Genome variation in Cryptococcus gattii, an emerging pathogen of immunocompetent hosts. D'Souza C.A., Kronstad J.W., Taylor G., Warren R., Yuen M., Hu G., Jung W.H., Sham A., Kidd S.E., Tangen K. et al. MBio 2:E342-E342(2011) · UniProtKB (6,560) |
| Insights into evolution of multicellular fungi from the assembled chromosomes of the mushroom Coprinopsis cinerea (Coprinus cinereus). Stajich J.E., Wilke S.K., Ahren D., Au C.H., Birren B.W., Borodovsky M., Burns C., Canbaeck B., Casselton L.A., Cheng C.K. et al. Proc. Natl. Acad. Sci. U.S.A. 107:11889-11894(2010) · UniProtKB (13,335) |
| Population genomic sequencing of Coccidioides fungi reveals recent hybridization and transposon control. Neafsey D.E., Barker B.M., Sharpton T.J., Stajich J.E., Park D.J., Whiston E., Hung C.-Y., McMahan C., White J., Sykes S. et al. Genome Res. 20:938-946(2010) · UniProtKB (9,706) |
| A catalog of reference genomes from the human microbiome. Nelson K.E., Weinstock G.M., Highlander S.K., Worley K.C., Creasy H.H., Wortman J.R., Rusch D.B., Mitreva M., Sodergren E., Chinwalla A.T. et al. Science 328:994-999(2010) · UniProtKB (2,264) |
| Comparative genomic analyses of the human fungal pathogens Coccidioides and their relatives. Sharpton T.J., Stajich J.E., Rounsley S.D., Gardner M.J., Wortman J.R., Jordar V.S., Maiti R., Kodira C.D., Neafsey D.E., Zeng Q. et al. Genome Res. 19:1722-1731(2009) · UniProtKB (33,944) |
| Genomic analysis of the basal lineage fungus Rhizopus oryzae reveals a whole-genome duplication. Ma L.-J., Ibrahim A.S., Skory C., Grabherr M.G., Burger G., Butler M., Elias M., Idnurm A., Lang B.F., Sone T. et al. PLoS Genet. 5:E1000549-E1000549(2009) · UniProtKB (16,968) |
| Evolution of pathogenicity and sexual reproduction in eight Candida genomes. Butler G., Rasmussen M.D., Lin M.F., Santos M.A.S., Sakthikumar S., Munro C.A., Rheinbay E., Grabherr M., Forche A., Reedy J.L. et al. Nature 459:657-662(2009) · UniProtKB (35,375) |
| A set of reference sequences for the hepatitis C genotypes 4d, 4f, and 4k covering the full open reading frame. Kuntzen T., Berical A., Ndjomou J., Bennett P., Schneidewind A., Lennon N., Birren B.W., Kuiken C., Henn M.R., Simmonds P. et al. J. Med. Virol. 80:1370-1378(2008) · UniProtKB (7) |
| Dothideomycete-plant interactions illuminated by genome sequencing and EST analysis of the wheat pathogen Stagonospora nodorum. Hane J.K., Lowe R.G.T., Solomon P.S., Tan K.-C., Schoch C.L., Spatafora J.W., Crous P.W., Kodira C.D., Birren B.W., Galagan J.E. et al. Plant Cell 19:3347-3368(2007) · UniProtKB (15,999) |
| The Fusarium graminearum genome reveals a link between localized polymorphism and pathogen specialization. Cuomo C.A., Gueldener U., Xu J.-R., Trail F., Turgeon B.G., Di Pietro A., Walton J.D., Ma L.-J., Baker S.E., Rep M. et al. Science 317:1400-1402(2007) · UniProtKB (13,054) |
| Insights from the genome of the biotrophic fungal plant pathogen Ustilago maydis. Kaemper J., Kahmann R., Boelker M., Ma L.-J., Brefort T., Saville B.J., Banuett F., Kronstad J.W., Gold S.E., Mueller O. et al. Nature 444:97-101(2006) · UniProtKB (6,548) |
| DNA sequence of human chromosome 17 and analysis of rearrangement in the human lineage. Zody M.C., Garber M., Adams D.J., Sharpe T., Harrow J., Lupski J.R., Nicholson C., Searle S.M., Wilming L., Young S.K. et al. Nature 440:1045-1049(2006) · UniProtKB (4,580) |
| Analysis of the DNA sequence and duplication history of human chromosome 15. Zody M.C., Garber M., Sharpe T., Young S.K., Rowen L., O'Neill K., Whittaker C.A., Kamal M., Chang J.L., Cuomo C.A. et al. Nature 440:671-675(2006) · UniProtKB (2,293) |
| Human chromosome 11 DNA sequence and analysis including novel gene identification. Taylor T.D., Noguchi H., Totoki Y., Toyoda A., Kuroki Y., Dewar K., Lloyd C., Itoh T., Takeda T., Kim D.-W. et al. Nature 440:497-500(2006) · UniProtKB (4,187) |
| DNA sequence and analysis of human chromosome 8. Nusbaum C., Mikkelsen T.S., Zody M.C., Asakawa S., Taudien S., Garber M., Kodira C.D., Schueler M.G., Shimizu A., Whittaker C.A. et al. |
| Sequencing of Aspergillus nidulans and comparative analysis with A. fumigatus and A. oryzae. Galagan J.E., Calvo S.E., Cuomo C., Ma L.-J., Wortman J.R., Batzoglou S., Lee S.-I., Bastuerkmen M., Spevak C.C., Clutterbuck J. et al. Nature 438:1105-1115(2005) · UniProtKB (12,695) |
| DNA sequence and analysis of human chromosome 18. Nusbaum C., Zody M.C., Borowsky M.L., Kamal M., Kodira C.D., Taylor T.D., Whittaker C.A., Chang J.L., Cuomo C.A., Dewar K. et al. Nature 437:551-555(2005) · UniProtKB (1,105) |
| The genome sequence of the rice blast fungus Magnaporthe grisea. Dean R.A., Talbot N.J., Ebbole D.J., Farman M.L., Mitchell T.K., Orbach M.J., Thon M.R., Kulkarni R., Xu J.-R., Pan H. et al. Nature 434:980-986(2005) · UniProtKB (12,647) |